Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0641 |
Symbol | |
ID | 7257608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 720756 |
End bp | 722564 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643560558 |
Product | UvrD/REP helicase |
Protein accession | YP_002457142 |
Protein GI | 219666707 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATG CCAATCTTGC AGAAATAAAA GGAAAAATCT CGTCCCAGCA CGAAGGCGAC GAAAAACAGC TTGAGGTCAT CTTTTCTGGC AGCCATCGTC TGATTGTCGA GGCACCCGCT GGGTACGGAA AAACGACCAC AATGATTAGT CGCATTGCCT ATCTGTTTGC TTCGGGCGGC ATCCCTAACC CGAAGCGTAT TCTCGGCTTA ACGTTCAGCG TAAACGCCGC ACTTAAGGTC AAACGGGAAG TCGCCGAGAA ACTCCCCGCG CTTCTTGGCA CACAAAACAG CCCTATCGCA ATTAGCGAGA AGGTAACCGT CACAAACTAC CACGGATTCT GTAAAGGCGT TATTAAAAAA TACGGCTTTC TTATCGCAGA TGCACTGCGG AAGGATGTCA ATCTATTCAG AACCGTTAGC GATAGTGAAA TAGAAAGGCA GGCGACTCTG AAAACGGCTC TGTCAGCAGA TGAATACGAA GAACTCAAAT CCGTGGAAAT AGCAGTCAAA GAGGCTCACG TTCCCGATTC CCAGACAATC CAGGGTTACA ACGAGATAGT CATCAAGAAG TTGCTGCCGT TGGGGTACAT TACCCATAAC GCGGTTATTT TATTCGTCTT GGAGATGTTT GACCGCTTTG CTGAAGTGAA GAAGTTCTAC CAGAGCTACT ATCCGCTTAT CGTTGTAGAC GAGTTTCAGG ATACCAACTG CATTGCGTGG AATTTGCTTG AAGCGATAAT ATCAGAGCGT ACCCAGTTGA TTTTCCTTGG CGACCCACTT CAGAGGATTT ACGGCTTCAT AGGCGCTTTG CCGGACATAA TGACCACAGT AGCGGACAAG TACGGGATGA CCAAAGTAGC TCTCTCGAAA AACTACCGAT TCCGTAATAA CTCTGAAATG CTTAAATTGG ACAGAAATAT CAGAGCAAAT GCAGCGACTT GTTTTGAACC GAACATTCAA GATGATGATG TGGCGAGGGT GCCCGCATTC TGGGGGAGTA CCCAGCAAGA AGAGGCACGA CAGGTGGTGG CAAAAGTACA GGGTCTGATG GGCGATGGGA CGGATAAAAT CACTATCCTT TTCAGAGGTC GTGGTAGAAA CGCCGAAATC GTAGAGACTG AACTTGCTGA TAAAAAAGTG CCGTACTTCT ATGGTATGTT TACTGATGAA GATGCCGACT ACGTTGATTT TCACAACAAG TGCCAAGAAA TGTTCATAAA GAGGTTCGGG AAGTCAAAGA ACATCAATAA GAAAGCTCTA ACAGCTTTTT CTGATCGCGT GAAAACGGCT TATGCATCAG CAACAGGGAA AACCGTTGAT TCGTTACTTC GGCTACTTGA TGCGCTTGTC GAGAAGGTAT CCATTGATTA CTCCGATCTT TTAGCAGATG ATAAGTATAA TCTGCTGCTG GACATTTTCG AGAATCGGCA GTTGAAACAG GCTATGGAGT ATGTGGATTC TCAAGTCATT CTCTCCACCG TCCACGGTGC AAAGGGACTT GAGTGGGACT ATGTTGTCCT GTGCGATGTA GAGCAGTGGG TATTTACGTT CCTGTGCCGT GATTGCCCAA GCCTAAGAGC GAGTGGCAAT TCTACTGCTT GCCGATTGCC GCAATCCATA CCAGACCAGA TGTTGAACCC TCTCCTAGAT GATTTATGTG TGTTCTATGT CGGATTGACA AGAGCCAGAA AACAGGCATT CATTTCGGCA AGTGGTGAAA GGTTCAATGC ACGGGGACAA CGGTTTACCA ATGGAAAAGT GTGTTGCTTG GCTCTGGTTC AAGGTGTGAA ACTATTACAA CATACATAA
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Protein sequence | MSDANLAEIK GKISSQHEGD EKQLEVIFSG SHRLIVEAPA GYGKTTTMIS RIAYLFASGG IPNPKRILGL TFSVNAALKV KREVAEKLPA LLGTQNSPIA ISEKVTVTNY HGFCKGVIKK YGFLIADALR KDVNLFRTVS DSEIERQATL KTALSADEYE ELKSVEIAVK EAHVPDSQTI QGYNEIVIKK LLPLGYITHN AVILFVLEMF DRFAEVKKFY QSYYPLIVVD EFQDTNCIAW NLLEAIISER TQLIFLGDPL QRIYGFIGAL PDIMTTVADK YGMTKVALSK NYRFRNNSEM LKLDRNIRAN AATCFEPNIQ DDDVARVPAF WGSTQQEEAR QVVAKVQGLM GDGTDKITIL FRGRGRNAEI VETELADKKV PYFYGMFTDE DADYVDFHNK CQEMFIKRFG KSKNINKKAL TAFSDRVKTA YASATGKTVD SLLRLLDALV EKVSIDYSDL LADDKYNLLL DIFENRQLKQ AMEYVDSQVI LSTVHGAKGL EWDYVVLCDV EQWVFTFLCR DCPSLRASGN STACRLPQSI PDQMLNPLLD DLCVFYVGLT RARKQAFISA SGERFNARGQ RFTNGKVCCL ALVQGVKLLQ HT
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