| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0619 |
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| Symbol | |
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| ID | 7257586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 680382 |
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| End bp | 681395 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643560537 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_002457121 |
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| Protein GI | 219666686 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TGAATAAGGT AGTGTCTGTT TTGGTGCTGA CGGCTATGGT GTTAATGCTC
ATTTCAGGCT GCGGCAGTAG TGCAGGCAGC AGCGGCGGCA ATGACCAGGA CAAGCAAAAA
CCGGCGGCCA ACACCCAACT GCGGATCATG TCCACATCCG GCGGCGACAA ATACTTTTTG
ACCACAGGCA TCTGTAAAAT CAGTGATGAT TCCAGCCTGC CGATTAAAGT AGTCCATCAA
ACGGTGGCCG GTGACGCGGA AGCAGTCCGC AGATTAAAAG CGGAAACCGC AGATATCGGC
ATGGCCAACG TCTTTGTGGC CTCCATGTTT TACAATGGCA CGTACACTTT CGAAAAAGAC
GGCGCTTTCA AGGAGATGAG AGCCTTATTC GCCGGACCCT CCGCTGTAGC TCAATTTGCC
GTCCGGGCAG ACTCCCCTGT CAAATCCTTC GAGGATATTA AAAATAAAAC CCGCATGGCC
ACCTTTATGG GCGCATCCCA GGTGTATACC AAATTGATCC TGGATGCCTA CGGCAAACAG
GAAAACGTGG ATTATATCTT TATTTCTTCC AATTATGCGG ATATGGCCGA CCAGATCAAG
GATAAAACGG TGGACGTCAT TCAATTCTGG TCAGGAGCTC CCTGTCCCCA GGCGGAAAAC
ATCGAGGCCG ATGTGCCGAT CCGCTTGTTG CCGGTCAATG ACCAAGCGAT TGAAAATATT
AAAAAGGCCA TCGATCCCTC CGCTTATCCC GCCGTGGTGA AAGCAGGAAC CTATAAAGGC
CAGGCGGAAG ATGTGACTGT ACCCGCCACC CCCACCTATT TCATAGCCCG GGCCAATACC
GATGAAGAGA CCATTTATAA TTTTACCCAA CTTGTGCTGG AGAACCTGGA CGAATTAGTG
AAAATCCATC CTCTGGCCAA GGAAATCGAC ATAAATAACC TGACCCAAGG ATTGCCCTTC
CCTTTGCATC CAGGTGCGGA AAAGTATCTC AAGGAAAAGG GGTATCTTAA ATAA
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| Protein sequence | MKKMNKVVSV LVLTAMVLML ISGCGSSAGS SGGNDQDKQK PAANTQLRIM STSGGDKYFL
TTGICKISDD SSLPIKVVHQ TVAGDAEAVR RLKAETADIG MANVFVASMF YNGTYTFEKD
GAFKEMRALF AGPSAVAQFA VRADSPVKSF EDIKNKTRMA TFMGASQVYT KLILDAYGKQ
ENVDYIFISS NYADMADQIK DKTVDVIQFW SGAPCPQAEN IEADVPIRLL PVNDQAIENI
KKAIDPSAYP AVVKAGTYKG QAEDVTVPAT PTYFIARANT DEETIYNFTQ LVLENLDELV
KIHPLAKEID INNLTQGLPF PLHPGAEKYL KEKGYLK
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