Gene Dhaf_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0554 
Symbol 
ID7257521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp613152 
End bp614057 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID643560473 
Productformate/nitrite transporter 
Protein accessionYP_002457057 
Protein GI219666622 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATC TGTATCTGAG TCCCAAAGAA ATAACAGAAG AATATGTAGC AATCGGCCAA 
AAGAAAGCAA GCACTCCGGC CTACAAACTG TTTATACTGG GAATACTGGC CGGCGCCTTG 
ATCGCTTTTG CCTCAGAAGG CTCAAATGTT GCCATTCACA CCTTGGATTC CGTTGGTTTA 
GGCAAGCTGC TGGCCGGGAT CATCTTCGGG ACAGGTCTTA TGATGGTGGT TATTACCGGT 
GCAGAGCTGT TCACAGGCAA TACCCTGATC GTCATTTCCT GTATTGAAAA GAAAGTCCGC 
TGGTTCGATA TGCTGAGAAA TTGGGTCATC GTCTATCTGG GCAATTTTAT AGGCGCCCTG 
ACCATCGTTA TGTTTATTAT CTATTCCGGC CAATTGGACT TTTCCGGAGG ACTTCTCGGC 
GGCTTCACCA TCAAAACCGC CGTCTACAAG ACCGGGTTAA CCTTCAACCA GGCTCTCTTA 
ATGGGGATTA TGTGCAATTG GCTGGTTTGT CTGGCGGTCT GGATGGCAGC TGCGGCCAAA 
GATATCGCGG GAAAGGTGCT GGCCATATTT TTCCCGATTA TGCTCTTTAT CACCTCCGGC 
TTTGAGCACA GCATCGCCAA TATGTACTAT ATTCCCGCAG GAATCATAGC CAAAATGAAT 
CCCGTCTGGG TAGAGCAGGC CGAGGCTTTG GGTGTCACGG CGGCCAAGCT GGCTCATCTC 
AATTGGGAAA GCTTTATAGT CAATAATCTT ATTCCGGTAA CCTTGGGCAA TATTATCGGG 
GGCAGTCTTT TTGTCGGTGT ATTCTATTGG CTGGGTACCC TGTACAAAGG GAGGCCGGCA 
GCCGCGGAAA AAACAGACCG CCTTATGCCG GGAAAATTAG ATAACGCTTG GGCAAAATCA 
AAATAA
 
Protein sequence
MANLYLSPKE ITEEYVAIGQ KKASTPAYKL FILGILAGAL IAFASEGSNV AIHTLDSVGL 
GKLLAGIIFG TGLMMVVITG AELFTGNTLI VISCIEKKVR WFDMLRNWVI VYLGNFIGAL 
TIVMFIIYSG QLDFSGGLLG GFTIKTAVYK TGLTFNQALL MGIMCNWLVC LAVWMAAAAK 
DIAGKVLAIF FPIMLFITSG FEHSIANMYY IPAGIIAKMN PVWVEQAEAL GVTAAKLAHL 
NWESFIVNNL IPVTLGNIIG GSLFVGVFYW LGTLYKGRPA AAEKTDRLMP GKLDNAWAKS 
K