Gene Dhaf_0550 details

Gene Information

• Locus tag: Dhaf_0550
• ID: 7257517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 607916
• End bp: 609958
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643560469
• Product: Nitrate reductase
• Protein accession: YP_002457053
• Protein GI: 219666618
• COG category: [C] Energy production and conversion
• COG ID: [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACTT TACATCATCA TATCTGTCCC CGAAACTGTT ATGACACGTG CAGCATAATC 
AGCACCACCC GCCATGGCCG GTTGGCCTCC ATCGAGGGCA ATCCTGCCCA CTCCTATACC 
CGGGGCAAGC TTTGCCCCAA AGTTATGGAT GAGATTCATA AAGTATACAG CCCGCAGCGG 
ATCCGCTACC CCCTGCGCCA GCGCAAACGC TTTTCGGGGC AATGGGAGCG GATCACCTGG 
GATGAAGCTC TGGAAACCAT CAGCCGGAAG ATTCTTGACC TTAAAGATAA GTATGGAACC 
ACCCTGCCCC TTGCTCACAA TAAATACTCC GGCAACTTCG GGATCCTTCA TAATGCCCTG 
GAGGCTTTTC TGACAGGTCT TGGTCCCACC ACCCGGGCCG TGGGCTCTCC CTGCTGGTCG 
GCAGGGGTGG AGGCTCAAGT CTTCGATTTC GGGGCCTTCT TTTGCTCCGA TCCTCTGGAT 
ATGGAGAAGG CTAAGCTCAT CTGGATCTGG GGAGCCAATC CCGCCTGGAA TGCCGCTCAC 
CAGATGCCCA TTATCTTTCG GGCTATGGAC CAAGGGGCCA AAGTCATTTG TCTGGATACC 
CATTTTTCAG CTACGGCTGC CCGGGTTCAT CAATTTGTGC GGGTGAATCC GGGTACGGAT 
GGGCTCTTAG CCTTAGGCCT GGCGAAAATT ATCGTCGATC ATCAGCTTAC AGATCCGGAG 
CTGCCCGACT ATTCACTGGG GTATAATGAA TTTATAGATT ATCTGAAGGC GGAGATTGAT 
CTCCGGAAAT GCTCGGCAGT GACGGGGGTT TCCCTGGAGA CCATGAAGGA ACTGGCCCTG 
GAGTATGGGG CGGTGAAACC GGCCTGCATC TGGGCGGGCT TTGGACTGCA GCGCTATACC 
AACGGGGGAC AGAATCTGAG AGCCATCGAC GCCTTAGGAG CCCTGACCGG GAATATCGGC 
CGGCCCGGCG GAGGAGTTCA GTACGGGCAT TTTGAAACCT GGCGTTTTGC CGGGCCCTTA 
GCCCATTCCC AATGCGGCCA TGCTCAGGAC CGGGAGTTGG ATATCAATCA ATTTCCCCAG 
CTGGCCTTAG CAGCCGATCC TCCTGTGAAA ATGCTCTGGA TCGCCAGCCG CAACCCCTTC 
CAGCAGGATG GCAATCATGC CGGCTGGCAA AAACTCAGTG AAACCTTGGA GCTTATCGTG 
GTTAGTGACC TCTTTCACAC CCGTTCCTCC GCCGCGGCCG ACCTCTTTCT TCCTGTGACC 
ACCCATTATG AACATTGGGA CCTTCATGCC AGCTACTGGC ATTACTATAT TGGGATCAAT 
GAACCGGCCG TTGAGCCGGT GGGGGAAGCC CGCTCCGATC TGCAGATTGC CTGGGATTTG 
TCGAAACGCC TTAATCAAAG CTCACCGGGC AGCTCGGCTT TTCCCACAGA AGGGTCGGAA 
AAGGAGTGGG TCCTCGGCGC CATCGGACCG GAGATGCTGG CCATACTGGG AATTGACTCG 
GCTGAGGAGC TGCTTAAGGG TCCCAGGCGG GTAAACTATC CCGGGACCGC CTGGCAGGGA 
CGGCAATTCC AAACTCCCTC AGGCAAGTAT GAATTTTATG CGGAGAAAGC TCAGGAATGG 
GGCCTCCCAC CTTTGCCTGT TTACCGGCCG CCACGTCAAG CACCCCCGGA AACTCCTCTG 
CGCCTGCTGA CCCCCCATCA TTTATCCGGG CTGAATTCCC AGGTCTATCT CTATTCCGAA 
GAGAGCGACT CCTTATTGAA AGCCCGGCTC CATCCTAAAA CCGCTGAAGG CTATGGCTTG 
AACAGAGGAG ACAAGGCCAT CCTATGGAAC CGGGGCGGGA GTTTCCCGGT CATCATCGAG 
CAGGATCTGG GCATAGGAGA GGGAGTTATC GTGATTTATC AGGAGAACCG GCCCAATCTA 
AAATCCCCCC ACCTGAATCT GCTCAACCTT GGCGAATTGA CCGATATGGG GAAATATGCC 
ACAGGAGCTT ATGGATTAGC CTTGAATGAG ACCTTTGTCG GAATCAGAAA AACCACCTCA 
TGA 

 

Protein sequence

MDTLHHHICP RNCYDTCSII STTRHGRLAS IEGNPAHSYT RGKLCPKVMD EIHKVYSPQR 
IRYPLRQRKR FSGQWERITW DEALETISRK ILDLKDKYGT TLPLAHNKYS GNFGILHNAL 
EAFLTGLGPT TRAVGSPCWS AGVEAQVFDF GAFFCSDPLD MEKAKLIWIW GANPAWNAAH 
QMPIIFRAMD QGAKVICLDT HFSATAARVH QFVRVNPGTD GLLALGLAKI IVDHQLTDPE 
LPDYSLGYNE FIDYLKAEID LRKCSAVTGV SLETMKELAL EYGAVKPACI WAGFGLQRYT 
NGGQNLRAID ALGALTGNIG RPGGGVQYGH FETWRFAGPL AHSQCGHAQD RELDINQFPQ 
LALAADPPVK MLWIASRNPF QQDGNHAGWQ KLSETLELIV VSDLFHTRSS AAADLFLPVT 
THYEHWDLHA SYWHYYIGIN EPAVEPVGEA RSDLQIAWDL SKRLNQSSPG SSAFPTEGSE 
KEWVLGAIGP EMLAILGIDS AEELLKGPRR VNYPGTAWQG RQFQTPSGKY EFYAEKAQEW 
GLPPLPVYRP PRQAPPETPL RLLTPHHLSG LNSQVYLYSE ESDSLLKARL HPKTAEGYGL 
NRGDKAILWN RGGSFPVIIE QDLGIGEGVI VIYQENRPNL KSPHLNLLNL GELTDMGKYA 
TGAYGLALNE TFVGIRKTTS