| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0545 |
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| Symbol | |
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| ID | 7257512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 601500 |
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| End bp | 603143 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643560464 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_002457048 |
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| Protein GI | 219666613 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGTA GGAAGGTGAG CGGCTTGAAC CATATGCCTG AGGCAGTGAC ACTGGGGCGT
TTTCTTGAAC AGCAGAAGCT GGAGCCTCTT CGTGAAGATC CCCTTTTTCA GGAAGAGATG
CTGGCTCTGG CTATCCAAAC TTTATCTTTC AGCAGTCGGG AGAGCGGGCT CTCGGAGGGC
GGGAACAACA GGCTGCCGGG CAAGTCTCTG AGCTTGCCCT TAGCCGGCAG TCATGTGCAC
CTGGAGGATC AGGGAGAATA CCTTCGTCTT CGTATAGCGG AAGGTGAGGA AAAGACTCCC
CGTACCCAGG GCAGTTTCCT ATGTGCGTTT TCTCGGACCT GGGAGGACTT CTGTACCCAG
GCCGCGGACT GGATGGAGCG GGAAAAAGGG AGAATCCTGG GCGCTTGCGA AGCGTTCACC
AGGAATTTAA CCGAGCAGAT TACCCAGGGA TACGGGCTGA GCATTCTTGC CGAGCTCAAA
AAAACTCTGG GAGTGGATCT CTTTCTTTTG GATAAGCATT TTAAGGTTCT GTCCTGGGAA
GGAGGAGGGC GCTTCCCCTT TCATCCTGTT TCCTTTGTGA CGCCGAAGCT CTCCCATTTC
AAATCCATGG ATTTACTGCT GGAGACTCCC TTGGGCATAG GAAAATGGAA TGACGCCCAG
TATAAGGAGC TTCCTTTAAG CTGGTATCCT CTGGCAGGCC ATCAGGGGGT GCTTGGATAC
ATCGGTTTGG GAATAGAGCA GGGGGAGCTG AATCCGGTGG GGAGACTCTT CCTCTATAAA
GCAGCGGTCC TGCTTTACTT TGAACTGGCA AAAGCCCAAT CCGTAGAGGA CACGGAGCGC
CAGCATTATC GGGATTTCCT TTTTGATCTT CTGTATAATA ACTTCGACTC TCTGGAAGTG
GTGCAATCAC GGGGCAAGCT TTGGGGAATG GATCTGACCA AACCCCACCT GGTGGTGGTT
GGAGAGATCC CCGGCTATGA CCCGGACTCC ATGGACCAGT TAGCTTTTCA GGAACTTCTG
GATACTGTGT CCACGGCCTT GCGCAGTCAG CCCCGGACCA TCTTCCTGGA ACGCAATGAT
CAGATTGTCC TTCTTTATCC CCTGGAAGGG ATGATACCCC TCAGTCAATG GGAAGCTACA
GCCAAAAAAC TGCTCAGTCC TCTCTTAATC TTACTGGAAG GCCTGGAAGA GGAGCGGTCC
ATGATGTTTG GAGTGGGCAA TCTTTATCCT TCCGCCCGCT TTATCCACCG CAGCTTTCAG
GAAGCTAAGT CCGCCCTGGA GCTGGGGCAA TTGTTCAACC TTCAGGAACG GGTGATCCTG
TTTCAGGATT TGGGAGTGAT GCGGCTTTTG CTCAATCTTG AGCAGCAGGA GCTGGAGGAT
TTTCGCAATG AGGTCTTGGG CCCTTTGCTT AAATTCGATC AGGAGAATAA TCTGCACCTG
GAAGAGACCC TGCTGGCTTA TCTGGCTTCG GACGGGGATT TGAATCTGGC GGGAGACCGG
TTGTTTCTCC ATCCCAATAC CCTGCGCTAT CGCTTGAAAA AGGCTGCCGA GGTCCTGGAT
CGGGATCTGA ACAGCCTGGA AACCCGGATG AATTTGTTTA TCGCCTTAAA AATCGGCCGG
CTGAAGTCCC TCTGGCAGGA ATGA
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| Protein sequence | MSRRKVSGLN HMPEAVTLGR FLEQQKLEPL REDPLFQEEM LALAIQTLSF SSRESGLSEG
GNNRLPGKSL SLPLAGSHVH LEDQGEYLRL RIAEGEEKTP RTQGSFLCAF SRTWEDFCTQ
AADWMEREKG RILGACEAFT RNLTEQITQG YGLSILAELK KTLGVDLFLL DKHFKVLSWE
GGGRFPFHPV SFVTPKLSHF KSMDLLLETP LGIGKWNDAQ YKELPLSWYP LAGHQGVLGY
IGLGIEQGEL NPVGRLFLYK AAVLLYFELA KAQSVEDTER QHYRDFLFDL LYNNFDSLEV
VQSRGKLWGM DLTKPHLVVV GEIPGYDPDS MDQLAFQELL DTVSTALRSQ PRTIFLERND
QIVLLYPLEG MIPLSQWEAT AKKLLSPLLI LLEGLEEERS MMFGVGNLYP SARFIHRSFQ
EAKSALELGQ LFNLQERVIL FQDLGVMRLL LNLEQQELED FRNEVLGPLL KFDQENNLHL
EETLLAYLAS DGDLNLAGDR LFLHPNTLRY RLKKAAEVLD RDLNSLETRM NLFIALKIGR
LKSLWQE
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