| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0531 |
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| Symbol | |
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| ID | 7257498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 584905 |
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| End bp | 587004 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643560450 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002457034 |
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| Protein GI | 219666599 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0137178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCGA AGTCGTTTAA CCTAAAAAAA TTCGATGACG TACTGAACCA AATGATCGTT
CCCAATCTTC AGCAAGCTCC CCTGTGGGAT GTGGACAACC GACCTATGAC CAAAGACCGT
TGGGAGACCA CCGTTCGCTG TAAGAAGTCC CTGCTGGACG GGGACCTCGA TGCCGTAATG
ACCTCTGAAT ATCCGCGCGC CGAGATTAAA AAGGTTTGGA TCGAATCCTA TAAGCTGGGC
TTACGGCCGT CAGATAAAAC CCATGATCCG GAGGAGGATA TGCTGAGAAA CGAAAATCTC
ATGCCCTTTG CCCAGATTGT CTTTCCGACG ATCCATGACC TCGGAGATTT CAATAAGATC
CCCATCTTTA TGAACATTCA CGACCGGCAG GGTACGTTCT TTTTTCAAAA AACAGAAAGC
GGTATCGAGT CTTATTTTGT TCAGGAGTTT CTTTTTAGCA ATGAACCCAG AGAAATCCGC
AAGAGCGGAC TGACTTCCCA TCTGCTCTGT AAACGCTCCA TGTGTCCGGC AGTACTGCTG
GGACCGGAGC ATTATCTGGA GAGCGACCTC AATATCAACA GTGCTTCCGC ACCGATTTTT
GACGTGAGCG GCAATCTCGA TGCCATCATT ACCCTGGCTT ACCGGGAAAC GGGAATTCCC
TGGGAAAAAG ATACCGCGGA GAAAGTGTCC ACCATCCTGA CTCAAGTGCT GTTGTTGGCA
CACCGGATTC AGACCAGTAT CCGCCCCCCT GCCGAGAGAG ACATCCCTGT TGGCCGGGAA
GAAATCCCTT GCCCCGACCT GATCAACGAT CCCCCCATTA TTGTCGTCGA CCCGGCAGGA
ACGATCATCG GCATTAATCC GGCAGGCCGC CGCTTTTTTC CCACCCTGCC GACCGATGGT
CAAGCCGGCA ATATTAGAAG GTATCTTCCT GCCAATTCCA AACTCCTTCC CCTTATCCAA
ACCCAGGCAC AAACGATCAT TACCGAAGTG ATTTGTTCCC CGCCGGCCAC CGGCCTTTAT
TCTGTTCAGA TCAGGCCTTT TGAAGCGGCA GGCAGATCCT GTTCGATCCT GCTTTTTTCC
AATGCCAAAG AGTCCGGCCA AGCTACGGCT CCGGGCAAAT GCTCACCGGC TGCCGACTGT
TTCAACAGTT TGATTGGCGA GAGTCATGCT TTCCGCAACG CCATTGATCA GGCTGTGTGT
TTCGCCAACT CAAATGGAAA TATCCTGCTG ACCGGGGAAA GCGGTACCGG CAAAGAATTG
TTTGCCAAAG CCATTCACAA CTGTCAGGAT AAAAAAGGGC CGTTTGTGGC CATCAACTGT
GCGGCAATCC CTCGTGAGCT GATCAGCAGT GAACTGTTTG GTTATGCTTC CGGTTCTTTT
ACCGGCGGGG ACAGGAAAGG GCGGAAGGGA AAAATCGAAA TGGCTGATGG GGGTACGTTA
TTTTTGGATG AAATCGGCGA TATGCCCTAT GAACTTCAAG CTGTCTTATT GCGTGTTCTC
CAGGACAAGC AGGTAACGCG GATCGGCGAT CACGTCTCCC ATCAAATTGA ATTCAATTTG
ATCACGGCCA CCAACCGTAA CCTTAAGGAT TTGATGGAGA GCGGTCAGTT TCGCCCCGAC
CTCTTCTACA GAATCTCCAT GTTCCCCATC AACATCCCGC CGTTACGGGA CCGAAAGGGG
GATATCAAGC TGCTTGTCTC CTATTTCATG AACAGCTGCG GGCAAAACAA TCCGGAGTCT
CTGTCCATCT CCAATGAAGC GCTCCAGATC CTGGAGGAAT ACGATTGGCC AGGCAATGTA
CGGCAACTGG AGAATGTAAT CCTGTATATG ATGACGATAG CCAAAAGCCG GAATTGCAAG
GTTCTCCTGC CGGAACATAT CCCGAATATT GTCATCCAGT CATCTCCACC GTCCCTTGCG
CCGGGAGAAG CTCCAGATAC TGAAAAGGCG GATGCTTATG GCACGATTCA TCATGTGGAA
AAAGTCATGC TGGAAAAAAT GCTGAAAGAA TTTAATCATG ATATTCCGTT AGTGGCTGAA
ATATTAGGGG TAAGCAAATC AACAGTCTAC CGCAAGATTA AAAGATATAA TCTGGCCTAA
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| Protein sequence | MQSKSFNLKK FDDVLNQMIV PNLQQAPLWD VDNRPMTKDR WETTVRCKKS LLDGDLDAVM
TSEYPRAEIK KVWIESYKLG LRPSDKTHDP EEDMLRNENL MPFAQIVFPT IHDLGDFNKI
PIFMNIHDRQ GTFFFQKTES GIESYFVQEF LFSNEPREIR KSGLTSHLLC KRSMCPAVLL
GPEHYLESDL NINSASAPIF DVSGNLDAII TLAYRETGIP WEKDTAEKVS TILTQVLLLA
HRIQTSIRPP AERDIPVGRE EIPCPDLIND PPIIVVDPAG TIIGINPAGR RFFPTLPTDG
QAGNIRRYLP ANSKLLPLIQ TQAQTIITEV ICSPPATGLY SVQIRPFEAA GRSCSILLFS
NAKESGQATA PGKCSPAADC FNSLIGESHA FRNAIDQAVC FANSNGNILL TGESGTGKEL
FAKAIHNCQD KKGPFVAINC AAIPRELISS ELFGYASGSF TGGDRKGRKG KIEMADGGTL
FLDEIGDMPY ELQAVLLRVL QDKQVTRIGD HVSHQIEFNL ITATNRNLKD LMESGQFRPD
LFYRISMFPI NIPPLRDRKG DIKLLVSYFM NSCGQNNPES LSISNEALQI LEEYDWPGNV
RQLENVILYM MTIAKSRNCK VLLPEHIPNI VIQSSPPSLA PGEAPDTEKA DAYGTIHHVE
KVMLEKMLKE FNHDIPLVAE ILGVSKSTVY RKIKRYNLA
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