Gene Dhaf_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0523 
Symbol 
ID7257490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp575149 
End bp575913 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content54% 
IMG OID643560442 
ProductABC transporter related 
Protein accessionYP_002457026 
Protein GI219666591 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTT TAGAAGTCAA TCATTTAGAA AAAGTGTATA CCACCCGCTT TGGGAGCCAG 
AAGATTCAGG CTTTGGCCAG TGTGTCCTTC AGCGTGGAAA AGGGAGAGTA CGTAGCCATT
ATGGGGGAGT CGGGTTCCGG CAAAACCACT CTGCTTAATA TTCTGGCTGC TCTGGATAAG
CCTACCGGGG GCACGGTCCT TCTCGACGGG CACAATCTGA GCAAGATCAG AGAGTCTGAC
ATTGCCGCCT TCCGCCGGGA TAATTTAGGC TTTGTGTTTC AGGATTTTAA TCTGCTGGAC
ACCTTTTCTC TTGAGGATAA TATCTTCCTG CCTCTGGTCC TGGCCGGCAA ATCCTACCCG
GAAATGAAAG CACGGCTCAC CCCCATTGCC AGGAAGCTGG GGATTGTGGA GCTGCTTGCC
AAATATCCCT ATGAGGTATC GGGGGGACAG AAGCAGAGAG CGGCGGTAGC CCGGGCCCTG
ATTACCAATC CCCGGCTGAT CCTGGCGGAC GAGCCTACCG GAGCTCTGGA TTCCAAAGCC
ACGGATGAAC TGCTCCGCCT GTTTGGGGAG ATCAACCGGG AGGGGCAGAC CCTTTTGATG
GTGACCCACT CAGTCAAGGC GGCCAGTCAT GCCGGCCGGG TGCTGTTCAT TAAAGATGGG
GAGGTATTTC ACCAGATTTA CCGGGGGAAC AGCAGCAATG AGGCGTTGTA TCAGAAGATA
TCCGATACCC TTACCCTGCT GGCGACAGGG GGGGACAGAC CATGA
 
Protein sequence
MTILEVNHLE KVYTTRFGSQ KIQALASVSF SVEKGEYVAI MGESGSGKTT LLNILAALDK 
PTGGTVLLDG HNLSKIRESD IAAFRRDNLG FVFQDFNLLD TFSLEDNIFL PLVLAGKSYP
EMKARLTPIA RKLGIVELLA KYPYEVSGGQ KQRAAVARAL ITNPRLILAD EPTGALDSKA
TDELLRLFGE INREGQTLLM VTHSVKAASH AGRVLFIKDG EVFHQIYRGN SSNEALYQKI
SDTLTLLATG GDRP