| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0515 |
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| Symbol | |
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| ID | 7257482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 565912 |
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| End bp | 567783 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643560434 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002457018 |
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| Protein GI | 219666583 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000178347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTCC ATTGGCGAAA ATTTCTCAAA GGCGAACTTA TTGAGAACGG AATCGCTCCA
ATGATCTACC GTTCCTGGCA ACGGAGCGTA AGCTACAATG TCAATCATAC TGAAATCTCT
CAAAATATGA TCTTAACTAC CTCTCAATTA CGTGAATTAA AGGACTCTCA GGAAGATATC
ATCCGCGCCG CTGAATCTGT GCTGCCCCAC CTGGGCAAGC TGTTGCAAAG TGCCAACTAC
ACTGTCTTAT TAGGTGAAAA AAAAGGCTTC ATTTTAGAAG CGTTAGGAGA TGGTCCGTTT
CTGACCAAAG CGCAAAAGAT TCATCTTTCT CCCGGGGCGA ATTGGCGGGA AGATATCAAA
GGTACCAATG CCATAGGAAC AGCACTCACT GAGGATTGTC CCATCACAGT CTCCGGCTGT
GAGCACTTTG TCCAGGAAAA TCATTTCATG TCCTGTTGGG CGGCACCCAT TCATGATGTA
CAGGGAGAAA TTGTTGGGTT TATCGATATA AGCGGTGAAA CGGGAAATCA TCAGGAGCAG
ATCATTGGGA TTGCCATTTT AGGGGCAAAG CTGATAGAGC AAAATTTGCG CACCTTAGAT
ATTGAGCGTC AGCTTAAATT TTATCGTGAA GGGGCAAAGC TGGCTATCGA TCTGCTCAAG
GAAGGATTCA TTTCCATAGA CCGGTTTGGC GTGGTTACCA ATATCAGCCC CAGCGGGGCA
TCCCTGATTG GACGCAAGCG CAACGATATT ATTGGCAAGC CTGTTGCAGA GGTATTCAGT
GCTCCCAAAG GCTGGATAGT CAATAATCAA GCGCTGGATC TTCACTTGAA AAATCAGTCC
GGTCATGAGA TCGCCTCATC CTGGCGGCGG GTTGCCGATG AGTCGGGAGA ATTCCTCGGA
GCATTTGGAA CGGTGCAGCT CACTGAGCCG CAAACCGCGA GTCCTGTTTG GGTCGGAAGC
AGTCCCAGCT CTCGACAGAT TATGGATCGT GTTTATAAGG CGGCTGCCGC TCCCTCTTCT
GTTCTTATTC AAGGGGAAAG CGGGACCGGA AAGGAAATTG TTGCCCGTAT GATCCATGAC
TTCAGCTCCT TCAGAGAGGG TCCCTTTGTA GCTCTTAACT GTGCAGCACT GCCCAGTTCT
CTTTTAGAGA GTGAATTATT TGGTTATGCT GACGGAGCTT TTACCGGTTC CCGCCGGGGC
GGTCAACCGG GCAAATTTGA ATTAGCTCAC CAGGGAACGA TTTTCCTGGA CGAGATTGGC
GACATGCCTT TGACGGCACA AGTTGCTCTG CTCCGCGTAC TTCAAGAAAA GGAAGTCACC
CGAATCGGAG GGACAAAACC ACACAAAATA AATGTTCGGA TCATTGCCGC CACCCATAAA
GATTTAAAAT CTTTGGTTGA GGCCAAGACG TTCCGTTTGG ATCTTTACTA CCGGCTCAAA
GTTATCACCA TTGAACTTTC GCCCCTTCGG GAACGGCTGG AGGACATTAG GGACCTGGTT
CCGTATTTTA TTCAAAAATC ATGCACCCTG AATCAGCTTA CCTGTTGCGG AATCGAGGAC
AATGTCTATC CCTACCTTTA CGCCTACTCC TGGCCGGGAA ATGTCCGCGA ATTGGAAAAC
TGTATCGAAA GCATGATTGC CATGGCCAAT TCCCATGTCT TAACAGTTGA CGATTTGCCC
TTGGAGCTCA GGCAAATCCC CGACTCCAAA AGGGTAGAGA GTCCCTCCCT CCTTGATCAG
CAAACTAAAC AAACGATTTT AGCTGCTCTT GCCCAGACTC AGGGGAAAAT TGCTCCGGCA
GCGCGGCTGT TAGGCATTGG TCGGAATACC CTGTATAGGA AAATAAAAGA GTTTGATATA
AGTGTTTTTT GA
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| Protein sequence | MNVHWRKFLK GELIENGIAP MIYRSWQRSV SYNVNHTEIS QNMILTTSQL RELKDSQEDI
IRAAESVLPH LGKLLQSANY TVLLGEKKGF ILEALGDGPF LTKAQKIHLS PGANWREDIK
GTNAIGTALT EDCPITVSGC EHFVQENHFM SCWAAPIHDV QGEIVGFIDI SGETGNHQEQ
IIGIAILGAK LIEQNLRTLD IERQLKFYRE GAKLAIDLLK EGFISIDRFG VVTNISPSGA
SLIGRKRNDI IGKPVAEVFS APKGWIVNNQ ALDLHLKNQS GHEIASSWRR VADESGEFLG
AFGTVQLTEP QTASPVWVGS SPSSRQIMDR VYKAAAAPSS VLIQGESGTG KEIVARMIHD
FSSFREGPFV ALNCAALPSS LLESELFGYA DGAFTGSRRG GQPGKFELAH QGTIFLDEIG
DMPLTAQVAL LRVLQEKEVT RIGGTKPHKI NVRIIAATHK DLKSLVEAKT FRLDLYYRLK
VITIELSPLR ERLEDIRDLV PYFIQKSCTL NQLTCCGIED NVYPYLYAYS WPGNVRELEN
CIESMIAMAN SHVLTVDDLP LELRQIPDSK RVESPSLLDQ QTKQTILAAL AQTQGKIAPA
ARLLGIGRNT LYRKIKEFDI SVF
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