Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0504 |
Symbol | |
ID | 7257471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 558457 |
End bp | 559176 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643560423 |
Product | ABC transporter related |
Protein accession | YP_002457007 |
Protein GI | 219666572 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000930668 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA TTGAGGCGAA AGGTCTTCGC AAACGATTTC GCAACCGCGA AGTTGTGAAA GGGATTGACA TGGAAATTCA GCAGGGTGAA ATTCTCGCTC TGATCGGCAC AAACGGGGCC GGCAAATCAA CCACCCTGGC CATGCTCCTG GGAATATTGC CAACCGATGC CGGGAAGATC ACCCGCTGGA GAGAGGATTA CCGGGCCCAT GTGGGTGTGC AGCTTCAAGC CACCCCTTTT TTTGAGGGTT ATACAGCCGA AGAAAATTTG CGGCTGTTTG CGGCATTGTA TCAGGTAAAG CTGGATAAGA AGCAAATAGA CGCAAAATTG GCAGAATGCA ATTTGCAGGA GGCCAGAAAA ACCCTGGCCT CCCGTTTGTC CGGCGGGCAA CAAAAAAGGC TGGCGATTGC TGTCACGACG ATCCACAATC CGGATTTAAT CATACTTGAC GAACCGGTCT CAGGGCTTGA CCCCCGTGCC CGGCAGGAAA TAAGAAGAAT GATTCAGCAA CTGGCGAAAA ACAAAGTGAC GGTGCTTTTT TCTTCTCATG ATATGGAGGA AGTATCCCGT ATCGCCAACC GGATCATTTT GATGCACGAC GGGCGAATTG TCGCTCAAGG CCGGCCGGAT CGTCTTTTAG AGCAGTATCA TGCGGAAAAT CTTGATGATT TGTATCTTGA GCTGACGGAT ACTGTACCAG GAAAGGAGAC ACAACAATGA
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Protein sequence | MNLIEAKGLR KRFRNREVVK GIDMEIQQGE ILALIGTNGA GKSTTLAMLL GILPTDAGKI TRWREDYRAH VGVQLQATPF FEGYTAEENL RLFAALYQVK LDKKQIDAKL AECNLQEARK TLASRLSGGQ QKRLAIAVTT IHNPDLIILD EPVSGLDPRA RQEIRRMIQQ LAKNKVTVLF SSHDMEEVSR IANRIILMHD GRIVAQGRPD RLLEQYHAEN LDDLYLELTD TVPGKETQQ
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