Gene Dhaf_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0504 
Symbol 
ID7257471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp558457 
End bp559176 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID643560423 
ProductABC transporter related 
Protein accessionYP_002457007 
Protein GI219666572 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000930668 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA TTGAGGCGAA AGGTCTTCGC AAACGATTTC GCAACCGCGA AGTTGTGAAA 
GGGATTGACA TGGAAATTCA GCAGGGTGAA ATTCTCGCTC TGATCGGCAC AAACGGGGCC
GGCAAATCAA CCACCCTGGC CATGCTCCTG GGAATATTGC CAACCGATGC CGGGAAGATC
ACCCGCTGGA GAGAGGATTA CCGGGCCCAT GTGGGTGTGC AGCTTCAAGC CACCCCTTTT
TTTGAGGGTT ATACAGCCGA AGAAAATTTG CGGCTGTTTG CGGCATTGTA TCAGGTAAAG
CTGGATAAGA AGCAAATAGA CGCAAAATTG GCAGAATGCA ATTTGCAGGA GGCCAGAAAA
ACCCTGGCCT CCCGTTTGTC CGGCGGGCAA CAAAAAAGGC TGGCGATTGC TGTCACGACG
ATCCACAATC CGGATTTAAT CATACTTGAC GAACCGGTCT CAGGGCTTGA CCCCCGTGCC
CGGCAGGAAA TAAGAAGAAT GATTCAGCAA CTGGCGAAAA ACAAAGTGAC GGTGCTTTTT
TCTTCTCATG ATATGGAGGA AGTATCCCGT ATCGCCAACC GGATCATTTT GATGCACGAC
GGGCGAATTG TCGCTCAAGG CCGGCCGGAT CGTCTTTTAG AGCAGTATCA TGCGGAAAAT
CTTGATGATT TGTATCTTGA GCTGACGGAT ACTGTACCAG GAAAGGAGAC ACAACAATGA
 
Protein sequence
MNLIEAKGLR KRFRNREVVK GIDMEIQQGE ILALIGTNGA GKSTTLAMLL GILPTDAGKI 
TRWREDYRAH VGVQLQATPF FEGYTAEENL RLFAALYQVK LDKKQIDAKL AECNLQEARK
TLASRLSGGQ QKRLAIAVTT IHNPDLIILD EPVSGLDPRA RQEIRRMIQQ LAKNKVTVLF
SSHDMEEVSR IANRIILMHD GRIVAQGRPD RLLEQYHAEN LDDLYLELTD TVPGKETQQ