Gene Dhaf_0503 details

Gene Information

• Locus tag: Dhaf_0503
• ID: 7257470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 557831
• End bp: 558370
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 643560422
• Product: transcriptional regulator, PadR-like family
• Protein accession: YP_002457006
• Protein GI: 219666571
• COG category: [K] Transcription
• COG ID: [COG1695] Predicted transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0000000100232
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACACGGC TACTTGTACT TGGCATGTTG GAGGTTCAGC CAATGTCCGG TTATGATATC 
CAGCAGGCGT TGCAGCTGAC AGATGCGGAA CGCTGGGGTG GTGTGTTGAT TGGTTCTATC 
TATCATGCGC TGAAAAAGAT GGAGCAAGAA GGCTATGTCG CCGTTACCAG CATAGAACGG 
ACAGGGCACC GTCAAAAGGC GGTTTATTCA ATAACTGAGG CCGGGAAAAT CTATCTTCAG 
GAACTGATCA AGGATGCGCT TAAAATGTCT TCTGTACTTT ATCCTTCAAC CCTTTATTCC 
GGCCTGTCGT TCTATGAGAA GCTGGCAAAG GATGAATGCC GAAAAGCACT GCAACAGCAA 
CGCAGTGCAT TAGAAGAAGA ATATAATGCT GTAAAGCAAG GCCTGGCGGC CAAAGACGCA 
GCCATGAATC ATAAAATTCC GCCCATGGTC ATGCTGGTGA TGGATAACAT GCTTTCCCTG 
ATCAAGCAGC AGCAGGACTT TGTTGATAAG GCGCTGGAAC TTTTAGACAC TGAGAATTAA 

 

Protein sequence

MTRLLVLGML EVQPMSGYDI QQALQLTDAE RWGGVLIGSI YHALKKMEQE GYVAVTSIER 
TGHRQKAVYS ITEAGKIYLQ ELIKDALKMS SVLYPSTLYS GLSFYEKLAK DECRKALQQQ 
RSALEEEYNA VKQGLAAKDA AMNHKIPPMV MLVMDNMLSL IKQQQDFVDK ALELLDTEN