Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0492 |
Symbol | |
ID | 7257459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 538655 |
End bp | 539371 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643560411 |
Product | ABC transporter related |
Protein accession | YP_002456995 |
Protein GI | 219666560 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.925941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATTTGG AGAAACCATT AATTGAAATC CGTAACCTTC GCAAAGAATA CATTATGGGG GAAGAAGTTG TTGTCGCTTT AAAACGAATA AACTTCTCCA TAAATCGCGG GGAACTGTGC TGCATATTCG GCGCGTCAGG TTCTGGAAAA AGTACGCTTT TAAATCAATT GGCAGGGATG GAGAAACCTT CTAAGGGGGG CGTAAAAATA GGCGGTGTCC CCATTTCCCA TTTAAATGAA GATCAGCTTG CCGAATTCAG GCAAAAATAT ATCGGCTTTG TCTTCCAGTC TTATAATTTG CTGCCTATGC TGACCGCCAC AGAAAATGTG GCCCTGCCCC TGATGTTTCG TGGTGTGCCG GAAGGAAAAC GCAATGCCAT GGCCCAGAGC ATGCTGCAAA AGGTCGGGCT TGGGCATCGA TTGCATCACT ATCCCGGACA AATGTCGGGG GGGCAGCAGC AGCGGGTGGG AATTGCCAGG GCCTTTGTCA CAAAACCTGC GGTTGTTTTT GCGGATGAGC CTACCGGGAA CCTTGATACA AAAACAACCA AAGAAGTTAT GACTATGATC AAAAACTTTG CAGGGACGTT TAAGCAAACC ATCATCCTGG TCACCCATGA CCCGGAAATG ACAGTTTATG CCGACCGGAT TGTGACACTG GTAGATGGCG AGATTGTCAG CAATGAAATA AAAAATAAAC CGATTAACGG GAATTAA
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Protein sequence | MDLEKPLIEI RNLRKEYIMG EEVVVALKRI NFSINRGELC CIFGASGSGK STLLNQLAGM EKPSKGGVKI GGVPISHLNE DQLAEFRQKY IGFVFQSYNL LPMLTATENV ALPLMFRGVP EGKRNAMAQS MLQKVGLGHR LHHYPGQMSG GQQQRVGIAR AFVTKPAVVF ADEPTGNLDT KTTKEVMTMI KNFAGTFKQT IILVTHDPEM TVYADRIVTL VDGEIVSNEI KNKPINGN
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