Gene Dhaf_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0492 
Symbol 
ID7257459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp538655 
End bp539371 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID643560411 
ProductABC transporter related 
Protein accessionYP_002456995 
Protein GI219666560 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.925941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATTTGG AGAAACCATT AATTGAAATC CGTAACCTTC GCAAAGAATA CATTATGGGG 
GAAGAAGTTG TTGTCGCTTT AAAACGAATA AACTTCTCCA TAAATCGCGG GGAACTGTGC
TGCATATTCG GCGCGTCAGG TTCTGGAAAA AGTACGCTTT TAAATCAATT GGCAGGGATG
GAGAAACCTT CTAAGGGGGG CGTAAAAATA GGCGGTGTCC CCATTTCCCA TTTAAATGAA
GATCAGCTTG CCGAATTCAG GCAAAAATAT ATCGGCTTTG TCTTCCAGTC TTATAATTTG
CTGCCTATGC TGACCGCCAC AGAAAATGTG GCCCTGCCCC TGATGTTTCG TGGTGTGCCG
GAAGGAAAAC GCAATGCCAT GGCCCAGAGC ATGCTGCAAA AGGTCGGGCT TGGGCATCGA
TTGCATCACT ATCCCGGACA AATGTCGGGG GGGCAGCAGC AGCGGGTGGG AATTGCCAGG
GCCTTTGTCA CAAAACCTGC GGTTGTTTTT GCGGATGAGC CTACCGGGAA CCTTGATACA
AAAACAACCA AAGAAGTTAT GACTATGATC AAAAACTTTG CAGGGACGTT TAAGCAAACC
ATCATCCTGG TCACCCATGA CCCGGAAATG ACAGTTTATG CCGACCGGAT TGTGACACTG
GTAGATGGCG AGATTGTCAG CAATGAAATA AAAAATAAAC CGATTAACGG GAATTAA
 
Protein sequence
MDLEKPLIEI RNLRKEYIMG EEVVVALKRI NFSINRGELC CIFGASGSGK STLLNQLAGM 
EKPSKGGVKI GGVPISHLNE DQLAEFRQKY IGFVFQSYNL LPMLTATENV ALPLMFRGVP
EGKRNAMAQS MLQKVGLGHR LHHYPGQMSG GQQQRVGIAR AFVTKPAVVF ADEPTGNLDT
KTTKEVMTMI KNFAGTFKQT IILVTHDPEM TVYADRIVTL VDGEIVSNEI KNKPINGN