| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0490 |
|---|
| Symbol | |
|---|
| ID | 7257457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 534737 |
|---|
| End bp | 536068 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643560409 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002456993 |
|---|
| Protein GI | 219666558 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTGGA AAGATATTTT AAAAATGTGC CTGCGCAATT TGCGCCGCCG CAAATCCAGA
ACCTTATTGA CCGTGCTGGG GGTACTGATC GGGTGTTGCA GCATTGTCAT TATGGTATCC
ATCGGCATCG GCACGAAAGT CTCCCAGGAA GAAATGCTGG CGGAAATGGG AGATTTGACA
ATTATCACCG TTATGGTGCC CAATATGGGC AACGATCAAA ATAAACTGGA TGATGCCGGC
ATCAGAACGA TTGCTCAGAT ACCCAATGTC ATCGCCGTAT CGCCGAAAAT CTCTCCCGAC
GAACTGTTCA ACGATATTTA CTTTAAGATC TACGCCGGAA TTGGCGACAG ATATATCAAC
GATTGGCTCC CGGTGGCGGC CTATGACAGC TCCAGCCTGG AAAAACTGGG ATTCAAGCTT
GTGGATGGAG CATACCCCGC CACTACTAAG GGGGTGCTGG TCGGCGAAAT GTTTGCTTAC
AATTTCCGGG ATTCCTATCG GCCGGAAGGA AGCAATCGGG TTGACCGTTA CGCCAATATT
GATTTTAACA ATTTCGATCC GGACCAACTC AAGAACAATA TGCCGGACCC CTACTTCAAC
CCGCTCACGT CCTCCCTGAC TCTGGTCCTG GAAAAGGAAG GCATCGCCAA GTACAGCATC
CCCCTTGAAG CAACCGGACG CGTCAAAGAA GATTACAACA AAGGTTACGA AACCAGCGAA
GGTGTCTTGC TGGACCTGGC TTTTCTGGAA CAGATCTTAA AGGATTCCGG TGCGGCAAAA
AACACGACCG AAAAGAAAAG CTATCAAAAT GCTCTTGTTA AGGTAGACCA CATTTCCAAA
GTCGCCGAAG TGGAAAAGGA AATCAAGCGG CTTGGCTTTG ATACACGATC TATGGAAAGC
ATCCGTGAGC CCATGGAAAA AGAAGCGCGG CAAAAACAGC TGATGCTGGG AGGACTGGGA
GCTATTTCAT TGTTCGTGGC CGCTATTGGG ATTACCAATA CGATGATTAT GTCCATCTCT
GAGCGGACCA AGGAAATCGG CATTATGAAA GCGCTGGGCT GCTATGTAAA GGATATCCGT
ATTATTTTTC TTACGGAATC CGGTATTATT GGTTTCCTGG GTGGAGTTGT CGGCAATGTC
GTCAGTCTGA TCATTTCACT GATCATGAAT TTTGTTTCGG AAGGTGCCGG CGGCAGCAAA
CTATCCATTA TACCCCTCTG GCTTATCGGC TTTGCCGTTG TCTTTTCAAT TTTTATCGGG
GTGGGCTCCG GGTACTATCC CGCCAACAAA GCCGTGAAAA TATCGGCGCT GGAAGCAATT
AAAAGCGATT GA
|
|---|
| Protein sequence | MTWKDILKMC LRNLRRRKSR TLLTVLGVLI GCCSIVIMVS IGIGTKVSQE EMLAEMGDLT
IITVMVPNMG NDQNKLDDAG IRTIAQIPNV IAVSPKISPD ELFNDIYFKI YAGIGDRYIN
DWLPVAAYDS SSLEKLGFKL VDGAYPATTK GVLVGEMFAY NFRDSYRPEG SNRVDRYANI
DFNNFDPDQL KNNMPDPYFN PLTSSLTLVL EKEGIAKYSI PLEATGRVKE DYNKGYETSE
GVLLDLAFLE QILKDSGAAK NTTEKKSYQN ALVKVDHISK VAEVEKEIKR LGFDTRSMES
IREPMEKEAR QKQLMLGGLG AISLFVAAIG ITNTMIMSIS ERTKEIGIMK ALGCYVKDIR
IIFLTESGII GFLGGVVGNV VSLIISLIMN FVSEGAGGSK LSIIPLWLIG FAVVFSIFIG
VGSGYYPANK AVKISALEAI KSD
|
|---|
| |