Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0477 |
Symbol | |
ID | 7257444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 514916 |
End bp | 516583 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643560396 |
Product | alkyl hydroperoxide reductase F subunit |
Protein accession | YP_002456980 |
Protein GI | 219666545 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase [COG3634] Alkyl hydroperoxide reductase, large subunit |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase [TIGR03143] putative alkyl hydroperoxide reductase F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000501172 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAC TCTATGATCT GATTATTATC GGTTCCGGCA GTGCGGGGAT GGCTGCGGGC ATTTATGCCG GGCGTTCGAA GCTTAAAACC CTTGTGATTG ACCGGGACCG GGCCGGAGGG CAGATCAAAA TCACCTCCGA GGTGGAGAAT TATCCGGGTA TCCTGAATAT TTCAGGGGAA GAGCTCAGCC AGGCCATGCG CAGGCAGGCG GAAAAATTCG GCGTGAAATT TCGGCAGGCG GCGGTGGAGT CCGTGGATTT GGCTGGGGAT ATTAAGAAAA TCCGGACGGC TGAAGGGGAC TATGAGGCTC TGGCTGTGAT CATTGCCACC GGGTCTGTGC CCAGAAAGCT GGGCTTCATT GGGGAAGAGG AATTCAGAGG ACGGGGTATC GGCTATTGTG CAACCTGTGA CGGGGAGTTT TTCACAGGGA TGGATGTTTT CGTGATCGGA GGAGGGCTGG CTGCGGCGGA GGAAGGGATT TTCCTGACCC GCTATGCCAG AAAAGTCACC ATGATCGTCC GGGGGGATGG ATTTTCCTGC CCCCAAACCA TCTCCGAAAG AGTCCTGGCC CACCCGAAGA TCGAGGTGAA GTTCAACACC GAGCTTCGGG AAGCGGGCGG GGATGCGGTT CTCCGCTATG CTGAATTCGT GAATAACCGG AGCGGCGAAA GATGGCGGTA TGATGTAAGG GAACAGAAGC AGACTTTTGG GGTGTTTGTT TTCGTGGGAT ACATTCCGCA AAGCGCCGAA TATGCTCAGG AGGTCCGCAT CGATGAGCGG GGCTATATTC CCACCGATGA GAGCATGGGC ACCAATGTGG AAGGGGTCTA TGCCGCAGGG GATATCCGTC CCAAGGAGCT GCGGCAGCTG GTTACTGCCG TAGCGGACGG CGCTATTGCG GCCACCAGCG CTGAGAAATA TCTGGTAGGG AAGAAGGAAC GGCTGGGGCT GGGTGAACTG GGCGAGCTGG GTGAATCGGG TGAGCGGGAT GAACTGAGCG ATGAGGAGAA AACTCCGGTC ACCCGGCAGG GAACGTCTTT ATTGGACGAC TCCCTTAAGG AGCAGTTGGT GCCTATTCTG GAACGGCTGG AAAACCGGAT TGGGTTGCTG GCCTTTCTGG AGGGGAGCAG CGGGTTCAGC GAGGAACTGC GGAGCTTTCT GTCCGAGTTT GCCGGACTGA CTGATAAGGT GGAGGTTGAG TTCCTGAACC GGGGTGAGGA CGCGGTCAGA GAGAAAGAAG CCAAGATCAC CCTCTTCCCC GCCGTTGCGG TGCTGGGACC GGACGGGGTC TATACGGGAG TGCAGTTTCA CGGCATACCC GGCGGCCACG AAATCAACTC TTTTATTCTG GCCCTATATA ACGCGGCAGG ACCTGGCCAG GCGGTAGGAG AAGAGACCCT GGCCAAAATC CGGAGAGTGA GCAGGAAAGT CAACTTCAAA ATCGGGGTTT CGCTTTCCTG CACTCTCTGC CCGGATGTAG TGACTCTGGC CCAGTTGATG GCCTTGAAAA ATCCCCTGAT CGAGGCGGAG ATGATCGACG TGGCTCATTA CCCCGACTTT AAAAACAAGT ACGGGATTAT GAGCGTACCG GCTATTGTCG TCAACGATGA AAAAGTCGTT TTCGGCAAGA AGAATCTGGA GGAATTGCTG GAGCTGGCGG GAGGTTAA
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Protein sequence | MKELYDLIII GSGSAGMAAG IYAGRSKLKT LVIDRDRAGG QIKITSEVEN YPGILNISGE ELSQAMRRQA EKFGVKFRQA AVESVDLAGD IKKIRTAEGD YEALAVIIAT GSVPRKLGFI GEEEFRGRGI GYCATCDGEF FTGMDVFVIG GGLAAAEEGI FLTRYARKVT MIVRGDGFSC PQTISERVLA HPKIEVKFNT ELREAGGDAV LRYAEFVNNR SGERWRYDVR EQKQTFGVFV FVGYIPQSAE YAQEVRIDER GYIPTDESMG TNVEGVYAAG DIRPKELRQL VTAVADGAIA ATSAEKYLVG KKERLGLGEL GELGESGERD ELSDEEKTPV TRQGTSLLDD SLKEQLVPIL ERLENRIGLL AFLEGSSGFS EELRSFLSEF AGLTDKVEVE FLNRGEDAVR EKEAKITLFP AVAVLGPDGV YTGVQFHGIP GGHEINSFIL ALYNAAGPGQ AVGEETLAKI RRVSRKVNFK IGVSLSCTLC PDVVTLAQLM ALKNPLIEAE MIDVAHYPDF KNKYGIMSVP AIVVNDEKVV FGKKNLEELL ELAGG
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