Gene Dhaf_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0477 
Symbol 
ID7257444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp514916 
End bp516583 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content56% 
IMG OID643560396 
Productalkyl hydroperoxide reductase F subunit 
Protein accessionYP_002456980 
Protein GI219666545 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase
[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase
[TIGR03143] putative alkyl hydroperoxide reductase F subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000501172 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC TCTATGATCT GATTATTATC GGTTCCGGCA GTGCGGGGAT GGCTGCGGGC 
ATTTATGCCG GGCGTTCGAA GCTTAAAACC CTTGTGATTG ACCGGGACCG GGCCGGAGGG
CAGATCAAAA TCACCTCCGA GGTGGAGAAT TATCCGGGTA TCCTGAATAT TTCAGGGGAA
GAGCTCAGCC AGGCCATGCG CAGGCAGGCG GAAAAATTCG GCGTGAAATT TCGGCAGGCG
GCGGTGGAGT CCGTGGATTT GGCTGGGGAT ATTAAGAAAA TCCGGACGGC TGAAGGGGAC
TATGAGGCTC TGGCTGTGAT CATTGCCACC GGGTCTGTGC CCAGAAAGCT GGGCTTCATT
GGGGAAGAGG AATTCAGAGG ACGGGGTATC GGCTATTGTG CAACCTGTGA CGGGGAGTTT
TTCACAGGGA TGGATGTTTT CGTGATCGGA GGAGGGCTGG CTGCGGCGGA GGAAGGGATT
TTCCTGACCC GCTATGCCAG AAAAGTCACC ATGATCGTCC GGGGGGATGG ATTTTCCTGC
CCCCAAACCA TCTCCGAAAG AGTCCTGGCC CACCCGAAGA TCGAGGTGAA GTTCAACACC
GAGCTTCGGG AAGCGGGCGG GGATGCGGTT CTCCGCTATG CTGAATTCGT GAATAACCGG
AGCGGCGAAA GATGGCGGTA TGATGTAAGG GAACAGAAGC AGACTTTTGG GGTGTTTGTT
TTCGTGGGAT ACATTCCGCA AAGCGCCGAA TATGCTCAGG AGGTCCGCAT CGATGAGCGG
GGCTATATTC CCACCGATGA GAGCATGGGC ACCAATGTGG AAGGGGTCTA TGCCGCAGGG
GATATCCGTC CCAAGGAGCT GCGGCAGCTG GTTACTGCCG TAGCGGACGG CGCTATTGCG
GCCACCAGCG CTGAGAAATA TCTGGTAGGG AAGAAGGAAC GGCTGGGGCT GGGTGAACTG
GGCGAGCTGG GTGAATCGGG TGAGCGGGAT GAACTGAGCG ATGAGGAGAA AACTCCGGTC
ACCCGGCAGG GAACGTCTTT ATTGGACGAC TCCCTTAAGG AGCAGTTGGT GCCTATTCTG
GAACGGCTGG AAAACCGGAT TGGGTTGCTG GCCTTTCTGG AGGGGAGCAG CGGGTTCAGC
GAGGAACTGC GGAGCTTTCT GTCCGAGTTT GCCGGACTGA CTGATAAGGT GGAGGTTGAG
TTCCTGAACC GGGGTGAGGA CGCGGTCAGA GAGAAAGAAG CCAAGATCAC CCTCTTCCCC
GCCGTTGCGG TGCTGGGACC GGACGGGGTC TATACGGGAG TGCAGTTTCA CGGCATACCC
GGCGGCCACG AAATCAACTC TTTTATTCTG GCCCTATATA ACGCGGCAGG ACCTGGCCAG
GCGGTAGGAG AAGAGACCCT GGCCAAAATC CGGAGAGTGA GCAGGAAAGT CAACTTCAAA
ATCGGGGTTT CGCTTTCCTG CACTCTCTGC CCGGATGTAG TGACTCTGGC CCAGTTGATG
GCCTTGAAAA ATCCCCTGAT CGAGGCGGAG ATGATCGACG TGGCTCATTA CCCCGACTTT
AAAAACAAGT ACGGGATTAT GAGCGTACCG GCTATTGTCG TCAACGATGA AAAAGTCGTT
TTCGGCAAGA AGAATCTGGA GGAATTGCTG GAGCTGGCGG GAGGTTAA
 
Protein sequence
MKELYDLIII GSGSAGMAAG IYAGRSKLKT LVIDRDRAGG QIKITSEVEN YPGILNISGE 
ELSQAMRRQA EKFGVKFRQA AVESVDLAGD IKKIRTAEGD YEALAVIIAT GSVPRKLGFI
GEEEFRGRGI GYCATCDGEF FTGMDVFVIG GGLAAAEEGI FLTRYARKVT MIVRGDGFSC
PQTISERVLA HPKIEVKFNT ELREAGGDAV LRYAEFVNNR SGERWRYDVR EQKQTFGVFV
FVGYIPQSAE YAQEVRIDER GYIPTDESMG TNVEGVYAAG DIRPKELRQL VTAVADGAIA
ATSAEKYLVG KKERLGLGEL GELGESGERD ELSDEEKTPV TRQGTSLLDD SLKEQLVPIL
ERLENRIGLL AFLEGSSGFS EELRSFLSEF AGLTDKVEVE FLNRGEDAVR EKEAKITLFP
AVAVLGPDGV YTGVQFHGIP GGHEINSFIL ALYNAAGPGQ AVGEETLAKI RRVSRKVNFK
IGVSLSCTLC PDVVTLAQLM ALKNPLIEAE MIDVAHYPDF KNKYGIMSVP AIVVNDEKVV
FGKKNLEELL ELAGG