Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0470 |
Symbol | |
ID | 7257437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 507606 |
End bp | 509258 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643560389 |
Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase |
Protein accession | YP_002456973 |
Protein GI | 219666538 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATT ATATTGCGGC CCTGGTTGAC GAATTATACC AGCTCGGTGT GCGTGAAGCG GTCATCAGTC CCGGTTCCCG TTCCACTCCC CTCTCCGTGC TGTTTTGCGA ATACGGCTTT CAGGTCTATG TCGGTATCGA TGAACGGTCG GCAGGGTTTT TCGCATTAGG CATAGCTAAG GAAAAAGAGC GCCCCGTTGT GCTGGTATGT TCCTCCGGTT CGGCGGTGGC CCATTACTTC CCGGCTATCG TCGAGGCAAA GCATTCCCAT GTCCCCTTAA TCGTTTTAAC GGCAGACCGG CCCCCCGAGT TGCGTCAGGT GGGGGCTCCT CAAACCATCG ATCAAATCAA GTTTTATCAT GATTACGCCA AGTACTTTGA AGAACTGGCT CTTCCTGAAG AAAGGGAAGG CATGTATCGG TATGTGCGCG GGGTGATGCG CAAAGCCTAT GTAAGTTCTT TGGATCAGGG ATATGGGGTA GCTCATATCA ATATCCCTTT GCGTGAACCC TTAAGCCCTG ATCTGGATGG GGTGGATTTC ACGGCGGGCC GCTTGGACTA TCCTTTTGCC TGGAAAACAG GGGAGAAGGG GCTAACTATG GATAGTTCGG TTTTCCAGGA TAAAAAGGGA ATCATTATCT GCGGCGGTGA TCCTTACGCG GATTATCACA GGGAGGTTCT GGAGCTGGCA GAGCGCTTAA AGGCCCCCCT GCTGGCCGAT CCTCTCGCCA ATTTTCGCAA TGATGACCAT CCCCTGATCA TGGATTGCTA TGACGCCTTT CTGAAAAGTG ATGCGGTTAA GGTGGAATTA AAGCCTGAAT TTATCATTCA TTTTGGTCAG ACTCCCGTTT CCAAACGGTT GCAGAATTTC ACGGCCATGC ATCAGGATGT TCTGTATTTT CAGGTCAATG ACTACTTTCA ATACCGGGAT CCCTCCTTGT CGATCAGCCG GTATCTTGTG GCCTCCCCCA AGGCTTTTGC CCGGTCTGTC AAGGTTCACA ATACCGATGA TGGCTACTCG GGACGGTGGC AGCATTATCA AGCCCGCATG CGCCGGCGGC TCAATCTCGC TCAGGATGAG GAGGAGCTGT TTGAAGGGAA GCTGGTGCAA AAGCTGCAGG ACAGTCTTCC CGAGGGGAGC CGTCTCTTTG TTGCCAATAG TATGGCCATC CGCGATGTGG ATTACTTTCT GGAGGCACGT CGACAACGGA TTAAAGTCTT AGGCAACCGG GGGGCCAATG GCATCGACGG CACGGTCTCC ACTGCTTTGG GAGTTGCCAC CAGCGGCCAT CCTACGGTGC TGCTGACCGG GGACTTAGCC TTCTTTCATG ATTTAAACGG CCTGCTGATC GGGAAAAACC ATGGACTGAA TTTAATTATC GTCCTCCTCA ATAATAATGG GGGTGCTATT TTTAAGTATC TGCCCCAAAG TGAAAATAAG TATTTTGAAT TGCTGTTTAT GACCCCTCAC GGTATGGATT TCAGCGGGCT TAAGACCCTC TATGATCTGA CTTATTATGA ACCGGTTGAT TATGAAAGCT TTGCGCAGAA TTTTCAGGAA GCCCTGACTT TAAGTGGGGT CAAGGTGCTG AATGTCAAAA TCGATGCCCG GCTGAGCAAA GAGCTCCATG ATCGGTTGAC GAATCTTGAT TAA
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Protein sequence | MTNYIAALVD ELYQLGVREA VISPGSRSTP LSVLFCEYGF QVYVGIDERS AGFFALGIAK EKERPVVLVC SSGSAVAHYF PAIVEAKHSH VPLIVLTADR PPELRQVGAP QTIDQIKFYH DYAKYFEELA LPEEREGMYR YVRGVMRKAY VSSLDQGYGV AHINIPLREP LSPDLDGVDF TAGRLDYPFA WKTGEKGLTM DSSVFQDKKG IIICGGDPYA DYHREVLELA ERLKAPLLAD PLANFRNDDH PLIMDCYDAF LKSDAVKVEL KPEFIIHFGQ TPVSKRLQNF TAMHQDVLYF QVNDYFQYRD PSLSISRYLV ASPKAFARSV KVHNTDDGYS GRWQHYQARM RRRLNLAQDE EELFEGKLVQ KLQDSLPEGS RLFVANSMAI RDVDYFLEAR RQRIKVLGNR GANGIDGTVS TALGVATSGH PTVLLTGDLA FFHDLNGLLI GKNHGLNLII VLLNNNGGAI FKYLPQSENK YFELLFMTPH GMDFSGLKTL YDLTYYEPVD YESFAQNFQE ALTLSGVKVL NVKIDARLSK ELHDRLTNLD
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