Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0469 |
Symbol | |
ID | 7257436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 506430 |
End bp | 507590 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643560388 |
Product | isochorismate synthase |
Protein accession | YP_002456972 |
Protein GI | 219666537 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000527427 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACTACC AAGTGAAGGA AGTGGCTTTA AAAGACAGCT TTGCTTTTTG GCAGAGCTTT GAAGATGAGG AGCGGGTGTT GTTTTATCAT CCTTTCCAGC AACAGCTTAT TATGGGGGCC AGGCGTTTAA AAACCTTTGG GCCGGGGGAG AGCTACCGGG GATATCCCTT TGTCTTTTCC ACCAGAACTT TCTTTCCCAC CCTTAAAGAT CCGAAATGGT CGGGGCTGGG CAATGAGACC ATAGCCTTCC AATACTATCT GGTTGAAGAA AAGGCCGGGC AAAAGCTTTA TTACGCCCAT GAGACAGCCG ATATTTCCGC TGTTCCCCCC AAAGAGTTTG CTTCCCATCG ACATGATTAT GAGATCCTTG CTGATGACTA TCAGGAATGG CAGGAGTTAT TCCAGTGTGC AAAACAAAAA GTTCTGGCCG GGAAAGTTCA GAAAGTGGTG ATTTCCCGGG AGATAAAAAT TCAGTGTAAT ACCATGGTGT CCGTTGAAAG TGTGTTGAAA AACCTTATGG AGAAAAATCC CCATTCCTTC GTTTTTGCCT ATTGTAAGGA GGGAAAGACC TTCCTTGGCG CAACGCCGGA AATAGTAGCG AGGAAGGAAA AAGGGCAAAT CATGAGCTAT GCTTTGGCGG GTACCCGGGC ACGAACTGCT GATGAAGAGG ATGAGCAAGG GAAGACGGCC CTTCTCAACG ATCCCAAAAA CCGTCATGAG CATCAAATAG TCCTGGATTA CATAGCCAAG GTCATGAACA CATACAGCGA TGAAGTCCTG ATCGGAGAGA CGACGACGTT GCAGCTCAGG AATTTGTATC ACCTGAAGAC TCCTCTGGCA GCGAAGGCCA AGGAGAATAG CTCTTTAACC GCTTGGGTTG CACGCCTGCA TCCTACCCCG GCCTTAGGCG GATATCCGGT GGCAGAGGCT TTGGCCATCA TCGCCCGCTG GGAAAAGCAT GAGCGGGGGC TATATGCCGC ACCGCTGGGC ATCATGAACG AAGAGGGGGA TGGCATCTTT GTGGCCGGAA TCCGCTCGGC TCTCATTGAG GGAAGGACAG TTTATGCCTA TACAGGCTGT GGGATCGTCG CCAGTTCAGA ATGTGCAGAG GAGTATGCGG AGACGGCCCA TAAAGCCAAA ACCATCCTGG AAAGTCTGTG A
|
Protein sequence | MNYQVKEVAL KDSFAFWQSF EDEERVLFYH PFQQQLIMGA RRLKTFGPGE SYRGYPFVFS TRTFFPTLKD PKWSGLGNET IAFQYYLVEE KAGQKLYYAH ETADISAVPP KEFASHRHDY EILADDYQEW QELFQCAKQK VLAGKVQKVV ISREIKIQCN TMVSVESVLK NLMEKNPHSF VFAYCKEGKT FLGATPEIVA RKEKGQIMSY ALAGTRARTA DEEDEQGKTA LLNDPKNRHE HQIVLDYIAK VMNTYSDEVL IGETTTLQLR NLYHLKTPLA AKAKENSSLT AWVARLHPTP ALGGYPVAEA LAIIARWEKH ERGLYAAPLG IMNEEGDGIF VAGIRSALIE GRTVYAYTGC GIVASSECAE EYAETAHKAK TILESL
|
| |