| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0468 |
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| Symbol | |
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| ID | 7257435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 505353 |
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| End bp | 506168 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643560387 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002456971 |
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| Protein GI | 219666536 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000442967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGATA AGAGGAATAT TTGTCTGAAG GTTGCTTATG ACGGGACCTA TTACCATGGG
TTTCAACGCC AGCCGGAATT CCACGGCCCC ACTATTCAAG GTACTCTGGA GACAGTGTGG
GCTAAGCTGG TGGAAGAACA AGTAACCCTC AATACAGCCG GACGAACAGA TACAGGGGTT
CATGCCGCCG GTCAAGTGGT AAATTTCCGG ACCGGGGCCC GGATCCCCGT AGATAAGATT
CCCAAGGCTT TTAACAGTCT GCTCCCCCGG GATATCCGCA TCCTGGCGGC TCAGGAAGCA
GCGGAGGATT TTCATGCCCG TTTCTCCGCT AAGTGGAAGC GCTATGACTA CCGGATCGAT
AACCATCCGG TAGCCGATGT CTTTACCCGG CTGTACTCTT TGCATGAGCC TGTCAGGCTG
GATTGGCAAA GGATGCAGCA GGGGGCCCAG TATTTGGTGG GACGGCATAA TTTTAAAGCT
TTTTCAGCGG CAGGGGGAAC CAGCAAAACC TTTGAACGCA CCCTCTATCT ATGTCAAGTG
GCGGAGAATC AGGGACATCT CCGGATTACC TGCATCGGCG ATGGCTTCCT TTATAATATG
GTGCGTATTA TTGCCGGGAC CTTGGTTTAT GTGGGGAAAA ACCGCATTCA GCCGGGGGAG
ATTCCGGATA TACTGGCGTC TCTCGATCGG AAACGGGGGG GAGTTACGGC AACTCCCCAG
GGACTCACTC TGAGTTATGT TCATTATGGG GAAGAGCTGC CCAGGGATAT TTTTCCTGAG
TTGTTTCAGG AGGGCGTTAG CCATGATTCT AGATAA
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| Protein sequence | MDDKRNICLK VAYDGTYYHG FQRQPEFHGP TIQGTLETVW AKLVEEQVTL NTAGRTDTGV
HAAGQVVNFR TGARIPVDKI PKAFNSLLPR DIRILAAQEA AEDFHARFSA KWKRYDYRID
NHPVADVFTR LYSLHEPVRL DWQRMQQGAQ YLVGRHNFKA FSAAGGTSKT FERTLYLCQV
AENQGHLRIT CIGDGFLYNM VRIIAGTLVY VGKNRIQPGE IPDILASLDR KRGGVTATPQ
GLTLSYVHYG EELPRDIFPE LFQEGVSHDS R
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