| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0464 |
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| Symbol | |
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| ID | 7257431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 497594 |
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| End bp | 499561 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643560383 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002456967 |
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| Protein GI | 219666532 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTGC ACGATTGTTT GAAGTTAGTG AGGGCGGAAG GGATTGATCC CGCATACTTC
CCGAAGATTA AGGATGAATG GCAGCGCTTT TTAGCGGGGG AAAAGGTTAA TAAGCAAATG
GTTCCGAGCG AAGTGATTGA ATCATGGGAG CGGAGCAGAA GCTATGGGAT CGATCCCTAT
GGGACAGACC CCCATCCGGT CAATCTCTCA GGAAAAGAAT ATAAAAATTT ACAGGAGATT
TTAAACAGAT ACGGGTTCTT TTTTGAGCGG ATAGTGGAAC TCGTGGAGCA GGACGATCTT
ACCCTATACC TTAATACTGC TGATGGTTTA AACTATCATC TGTTTCGCAG TGGTGGAATG
TCCGGTCATG CTTCCTTGGG ACATTGCAAT GAGAAAACCG TAGGTACCAC CGCCAGTTGC
CTTGCAAAAC TTTATAATCA GCCCATCCTT CTGGTTCACC CTTATCGGTA CAGTCAAAAC
TATACTCAGA ATCATGGTGT TTCGGCTCCG ATTCATAATG AAAAGAATGA AGTCATCGGA
GCTTTGGGTT TAGGATTTGA AGATCCCCGA TTTTGCATTC AGGCTTATAG TATGATCAGC
TTTATCGCCC AGGCTTTTGA TAGCTTGTAC CTGCCTTTGA CAAATGGGTA TGAGAAGCAT
ATCCAAAAGA TTATTGATTG TATGCCCCAT GGAGTTGCCT TTGTGGATGA GCGGGATACG
GTTCAGCTTT ATAACAATAA AATTTTGGAA CTATTGAAGA TTAGGCGCAA GAACAATATA
GAGAGCGAAT TAAACAAGCA TCTGGCAAGG TTGGGTGTCG GAGCAGGTTT TAAGGATAAG
CAAGAAGCTG CGGTTACTTG TGCAGAAATT CAGGTGGATA ATGAAAAACC TTATAAGCTT
ATCTTGCTTA AAGACAGGCT GGAGGGCAGA AAGCCTGGAA TTTCTCCATC TCCGGAAGGG
GAAGGAAAAG GGCTGTTTAC CTTTGACCAG ATTATTGGGG AAAGTACCCT CCTTAAGGAA
GCCAAAAAGG TTGCTGCCAA TGTAGCCAGG ACTTCGGTAC CGGTTATGAT TCATGGCGAG
AGCGGCACAG GTAAGGAAAT GTTTGCTCAA GCCATGCATT GTGCCAGTCC TCGCCGCAAC
GGACCTTTCG TGGCGATTAA CTGCGGGGCC CTCCCCGGGG AGCTGGTGGA AAGTGAGTTG
TTCGGTTATG AAGAAGGCTC TTTTACCGGT GCTCTGAAGG GAGGCAGGAT CGGTAAGGTA
GAAGCGGCTT CAGGAGGAAC CCTCTTCCTG GATGAGATCG AAAGCATGCC CCTTAAGGAT
CAAATCAAAC TCCTGCGTGT GCTCTCCACT GGGAAAGTGC AGAAGATCGG CAGCACCAAA
GAAATCCAAG TGGATGTCCG CATCGTGGCG GCCACCAAGA TCGATCTGCT GAAGCATGCC
GATGATGGTT TATTCCGTGA GGATTTATTC TACCGGATCA GTACCTTTAT TATTGAGCTG
CCGGCCTTAA GGCAGCGCAA GGAAGACATT GGAGCTTTGG CCGAGTATTT TATTAAGAAG
CTTGCCTCAA AATACGATCG GGGTAAGATT AAAATGGATC CAGTGTTCGT CGATGCGCTG
CAGAGGTATT ATTGGCGGGG CAATGTCCGG GAACTGGAGC ATGCTATGGA GCGGGCGATC
ATTATGCTGG AGGATGGAGA GACTCTCATG CTGGAGCATC TATCTCCGGG CATACAGCAA
GCTTATAGGA AAAGAACTGT GGAAAAATTA GTGGCAGAGA CAGTCCAGAC GACCTCCCAT
CGCCAAGGTT TGCTGGAATT GGCTGAGAGA AGGGTCATTG AGTATGTCCT GGAGCTGGTG
GATGGGAACC AAAGTCTGGC TGCCCAACAG CTGGGAATCA ATCGCAGGAC CCTCTACACG
AAGCTCAATG GTAAATCCAA TTCCGGCAGA GAGGTATTGG ATGCATAA
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| Protein sequence | MRLHDCLKLV RAEGIDPAYF PKIKDEWQRF LAGEKVNKQM VPSEVIESWE RSRSYGIDPY
GTDPHPVNLS GKEYKNLQEI LNRYGFFFER IVELVEQDDL TLYLNTADGL NYHLFRSGGM
SGHASLGHCN EKTVGTTASC LAKLYNQPIL LVHPYRYSQN YTQNHGVSAP IHNEKNEVIG
ALGLGFEDPR FCIQAYSMIS FIAQAFDSLY LPLTNGYEKH IQKIIDCMPH GVAFVDERDT
VQLYNNKILE LLKIRRKNNI ESELNKHLAR LGVGAGFKDK QEAAVTCAEI QVDNEKPYKL
ILLKDRLEGR KPGISPSPEG EGKGLFTFDQ IIGESTLLKE AKKVAANVAR TSVPVMIHGE
SGTGKEMFAQ AMHCASPRRN GPFVAINCGA LPGELVESEL FGYEEGSFTG ALKGGRIGKV
EAASGGTLFL DEIESMPLKD QIKLLRVLST GKVQKIGSTK EIQVDVRIVA ATKIDLLKHA
DDGLFREDLF YRISTFIIEL PALRQRKEDI GALAEYFIKK LASKYDRGKI KMDPVFVDAL
QRYYWRGNVR ELEHAMERAI IMLEDGETLM LEHLSPGIQQ AYRKRTVEKL VAETVQTTSH
RQGLLELAER RVIEYVLELV DGNQSLAAQQ LGINRRTLYT KLNGKSNSGR EVLDA
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