Gene Dhaf_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0457 
Symbol 
ID7257424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp490785 
End bp491750 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID643560376 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002456960 
Protein GI219666525 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTT TAATGGAAAT TCAAAATCTC TCCAAACACT TTTCTGTAGA AAGCAACTTT 
TTCGGCAAAT CCAGCAGTTT GCTGAAGGCA GTGGACGATG TCTCGTTTAC CATTCATAAA 
GGAGAGGCTT TTGGTCTGGT GGGAGAATCC GGTTGCGGAA AAACCACTCT GGGTAAAATT 
ATTGTTAATC TCTACAGCCC CACAAAGGGC AGTATGATTT TTGAGGGCAA GGATCTTACC 
AAGCTTAAGG AAAATCAGCG CCGGGCCTAT TGCAAGGATA TGCAGATGAT TTTCCAGGAT 
CCTTACGCTT CCTTAAATCC CCGGATGACC GTAGGGGATA TCATTGCTGA GCCGATTGTG 
ATCAATAAGT TATTGCCGGC CAACAAGGTG GAGGAACGTG TCACTTACCT TTTGAACTGT 
GTCGGTCTGG CCCAGCATCA AAGAAACCGC TACCCTCACG AATTTTCCGG AGGCCAGCGC 
CAGCGGGTAG GGATTGCCCG GGCTTTGGCT GTAGAACCCA AGCTCATTGT CTGTGATGAG 
CCGGTTTCGG CCTTGGATGT GTCCATTCAA GCCCAGGTCC TTAATCTTTT GGCTGATCTG 
AAGGATGAAT TCGGGCTGAC CTATCTCTTC ATTGCCCATG GTTTGAATGT AGTGAAGCAT 
ATCAGCGACC GGGTAGGTGT CATGTATCTG GGGAAACTGG TGGAAATAGC CCCTAAAAAG 
GAGCTGTATG CCAATCCTTT GCATCCTTAT ACCCAGGCTT TGCTTTCCGC TATACCGATC 
ATTGATCCGG AGAAGAAAAA GCGGCGGATT ATTTTGGAAG GGGATGTGCC CAGCCCCATT 
AACCCCCCTG CCGGCTGCCG CTTCTGTTCC CGCTGTTTTA AGGAAATGCC TGTCTGTAAA 
GAAACAGCAC CGGAGCTGAA AGAGATTTCT CCGGGGCATT GGGTGGCCTG CCATCTTTTT 
GATTAG
 
Protein sequence
MSVLMEIQNL SKHFSVESNF FGKSSSLLKA VDDVSFTIHK GEAFGLVGES GCGKTTLGKI 
IVNLYSPTKG SMIFEGKDLT KLKENQRRAY CKDMQMIFQD PYASLNPRMT VGDIIAEPIV 
INKLLPANKV EERVTYLLNC VGLAQHQRNR YPHEFSGGQR QRVGIARALA VEPKLIVCDE 
PVSALDVSIQ AQVLNLLADL KDEFGLTYLF IAHGLNVVKH ISDRVGVMYL GKLVEIAPKK 
ELYANPLHPY TQALLSAIPI IDPEKKKRRI ILEGDVPSPI NPPAGCRFCS RCFKEMPVCK 
ETAPELKEIS PGHWVACHLF D