| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0447 |
|---|
| Symbol | rpsM |
|---|
| ID | 7257414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 481736 |
|---|
| End bp | 482107 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643560366 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | YP_002456950 |
|---|
| Protein GI | 219666515 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.219651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTA TCGCTGGAGT AGATTTACCG CGGGAAAAAC GTGTTGAAGT GGGTCTGACC
TATATCTATG GTATCGGACT TCCCACCGCA CAAAAGATCC TCGCCAGAAC CGGCGTCAAC
CCGGAGACCC GTATTCGTGA CTTATCCGAG GAGGAAGTAA ACCGCCTTCG GGAAGTTATT
GATAAAGAAA TTAAAGTTGA AGGTGACTTG CGTCGGGAAG TATCCCTTAA TATTAAGCGC
TTGATGGAAA TCGGCTGCTA CCGTGGATTA CGTCATCGTC GCGGGCTTCC TGTACGGGGT
CAACGCACTA AGACGAATGC TCGTACCCGT AAAGGTCCGA TCAAGACCGT TGGCGCAAAA
CGTAAAAAGT AA
|
|---|
| Protein sequence | MARIAGVDLP REKRVEVGLT YIYGIGLPTA QKILARTGVN PETRIRDLSE EEVNRLREVI
DKEIKVEGDL RREVSLNIKR LMEIGCYRGL RHRRGLPVRG QRTKTNARTR KGPIKTVGAK
RKK
|
|---|
| |