Gene Dhaf_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0440 
SymbolrpmD 
ID7257407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp477830 
End bp478012 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content44% 
IMG OID643560359 
Product50S ribosomal protein L30 
Protein accessionYP_002456943 
Protein GI219666508 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATTA AAGTAACACT CGTAAAAAGC CCCATCGGGT ATTCAGAAAA CCAACGCAAA 
GTCCTTAAGT CTCTTGGCTT AGGTAAAATG GGCTCCAGTG TAGTTCATGA CGATACCCCC
AATATCCAAG GGATGATTCG CAAATGCGCA CACTTGGTTG CGGTGGAAAA CGTCGCAGAA
TAA
 
Protein sequence
MKIKVTLVKS PIGYSENQRK VLKSLGLGKM GSSVVHDDTP NIQGMIRKCA HLVAVENVAE