Gene Dhaf_0429 details

Gene Information

• Locus tag: Dhaf_0429
• Symbol: rplP
• ID: 7257396
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 473418
• End bp: 473855
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643560348
• Product: 50S ribosomal protein L16
• Protein accession: YP_002456932
• Protein GI: 219666497
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0009964
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAGTCC CAACCAGAGT AAAGCACCGG AAACAACATC GTGGCCGGAT GCATGGAAAA 
GCAACTCGCG GTAATGTGAT TACCTTCGGC GAGTATGGAT TAGTGGCTAT GGAGCCAGCA 
TGGATTACCA ATCGCCAGAT TGAGGCCGCT CGTATTGCCA TGACTCGTTA TATCAAACGG 
GGCGGTAAAG TTTGGATTAA AATTTTCCCG GATAAGCCGA TTACGGCTAA GCCGGCTGAG 
ACTCGTATGG GTAGTGGTAA AGGTTCCCCG GAATACTGGG TAGCCGTGGT CAAACCCGGT 
CGTGTAATGT TTGAATTGGC TGGGGTGCCT GAAGAGATTG CTAAAGAAGC ACTTCGCCTT 
GCTATGCATA AACTTCCGGT TAAGTGTAAG ATTGTACGCC GCGAGGAATT AGAGGGAGGT 
GACGCAAATG AAAACTAA 

 

Protein sequence

MLVPTRVKHR KQHRGRMHGK ATRGNVITFG EYGLVAMEPA WITNRQIEAA RIAMTRYIKR 
GGKVWIKIFP DKPITAKPAE TRMGSGKGSP EYWVAVVKPG RVMFELAGVP EEIAKEALRL 
AMHKLPVKCK IVRREELEGG DANEN