| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0407 |
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| Symbol | rplA |
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| ID | 7257374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 446907 |
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| End bp | 447599 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643560326 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002456910 |
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| Protein GI | 219666475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 4.3464e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAAAG TAGGTAAAAA CTATCAAGAA GCAGTTAAAG CTTTTGACCG TGCTGCTCTT
CATGAGCCTA TGGAAGCTTT AGCAGTCGTT AAGAAGATCG CTAAAGCAAA GTTTGACGAA
ACTGTTGAAG TAGCATTCAA GCTCGGTATC GATACCCGTC ATGCGGACCA ACAAATCCGT
GGAGCCCTTG TGCTTCCTCA CGGAACCGGT AAAACCCGCA GTGTGTTAGT CTTCGCTAAA
GGCGATAAAG CTAAAGAAGC TGAGGCTGCC GGTGCAGATT TTGTTGGTGC TGAAGACATG
ATTGCGAAAA TCGAGCAGGG TTGGTTTGGT TTCGATGTGG TTGTTGCTAC ACCGGATATG
ATGGGTATGG TCGGTAAACT GGGTCGTGTG CTCGGTCCTA AAGGACTTAT GCCAAACCCC
AAGACCGGTA CCGTTACCTT TGATGTAGCC AAAGCTGTCA AAGAGATCAA AGCCGGTAAG
ATTGAATATC GTGCTGACAA AGCCGGTATC ATTCATGCCC CTATCGGCAA AGTTTCCTTC
AGCGAAGAAC AACTCTATCA GAACTATAAG GTTCTGGTTG AGACCTTGGT TAAAGCGAAG
CCGGCTGCCG CTAAGGGTCA GTATATCCGC AGCGTCACAG TGTCCTCTAC TATGGGACCT
GGAGTACGGA TTAACCCGGT CAAAGCCAAT TAA
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| Protein sequence | MAKVGKNYQE AVKAFDRAAL HEPMEALAVV KKIAKAKFDE TVEVAFKLGI DTRHADQQIR
GALVLPHGTG KTRSVLVFAK GDKAKEAEAA GADFVGAEDM IAKIEQGWFG FDVVVATPDM
MGMVGKLGRV LGPKGLMPNP KTGTVTFDVA KAVKEIKAGK IEYRADKAGI IHAPIGKVSF
SEEQLYQNYK VLVETLVKAK PAAAKGQYIR SVTVSSTMGP GVRINPVKAN
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