Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0400 |
Symbol | thyX |
ID | 7257365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 442434 |
End bp | 443138 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643560317 |
Product | FAD-dependent thymidylate synthase |
Protein accession | YP_002456903 |
Protein GI | 219666468 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000037909 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGTTG AACTGATTCA ATACACACCG GATCCGGAAA AAGTCATTGC TGCCGCTGCT CGTTTGTGCT ATTCGCCTGA TCCGGTTCCG GAGCTCATGG AAAAGTTGGA TGAGGAAAAG GTAGCCAATC TTGTCCAGAA GCTTCGCGCC ATGGGTCATC TTTCGACCTT TGAACACATT AGCTTTCAAT TCTCCATCGA TGGGGTATCC CGTGCGTTAT CCCATCAATT GGTTCGCCAT CGGATCGCCA GCTATTCTCA ACGATCACAG CGGTATGTAA AAGAAGAGGG GTTTGACTTC GTCACCCCCC CGACCATACG CCGTAATCCC CAAACCCAGG AACGCTTCGA GAATATTATG GCCACTCTGC AGGAGGAATA CCAAGCTCTG TTGGCGATGG TTCCCGCAGA GGATGCCCGT TATATCCTTC CCAATGCCTG CACCACCTCG TTGATGGCTA CCTTTAATGC CCGCTCTTTG CTGAATTTCT TCGAACATCG AACCTGCATG CGCGCCCAGT GGGAAATTCG CATCCTGGCC GAAAAAATGC TGGAGCTGGT CCGGGAAGTT GCCCCTAATG TTTTTGGTCA AGCCGGGCCT ACCTGTGTCA CTCAAGGGGT TTGTCACGAA GGGGCCATGA GCTGCGGACG GATCAAGGCA CTGAAGAAGG AAGCGGAAAG GATGACCCTA ATCTATGACC GATGA
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Protein sequence | MNVELIQYTP DPEKVIAAAA RLCYSPDPVP ELMEKLDEEK VANLVQKLRA MGHLSTFEHI SFQFSIDGVS RALSHQLVRH RIASYSQRSQ RYVKEEGFDF VTPPTIRRNP QTQERFENIM ATLQEEYQAL LAMVPAEDAR YILPNACTTS LMATFNARSL LNFFEHRTCM RAQWEIRILA EKMLELVREV APNVFGQAGP TCVTQGVCHE GAMSCGRIKA LKKEAERMTL IYDR
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