Gene Dhaf_0369 details

Gene Information

• Locus tag: Dhaf_0369
• ID: 7257334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 408903
• End bp: 410777
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643560286
• Product: TRAP dicarboxylate transporter, DctM subunit
• Protein accession: YP_002456872
• Protein GI: 219666437
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component; [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component
• TIGRFAM ID: [TIGR00786] TRAP transporter, DctM subunit

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGACA TTGCAAAGAA TCCAGAAAAT TCCTGGAAAA AATGGCTGAG ATGGATCGAT 
GGGAATTTTG AAAAACCATT TCTTGTAATC GGCATGCTGG CGATTATTAT GCTGATTACC 
TATCAAACTC TTTATCGTTA TATCGTTTCC AATATCACCG GCGGTACGGC CATTGTGGGC 
TTAGAAGAAT TAGCGCGCTT TATTTTCATA TGGATCACCT ATTTGGCGAT CCCGCTGGCC 
ATTAAAGGGC GCAATAATAT CAGGGTCGAT ATTCTCTATG ACCGGATTTC CGACCGGTGG 
CAGAAAATCA GCTGGATCAT GGTCGACAGC TGCATCCTCG TCTTAACGGG TGTGATATTC 
TTTATGGGGA TCGATCATCT GCAGATGATG CTAAACTATC CTCAGACTTC CCCGGCGCTC 
AATATCCCCT TCTTTTTTCC CTACTTAATC CTACCCATTG GTTTTGGCTT AATGTCCATC 
CGGTGTATCC AGGACTTGGT CAAGCAGGCG TTGGAAATTG GCCTTAAGGA TACCTTGATC 
GGGGTTTTGG TTACGGCGGC AATTTTTTCT CCCCTCTTCT TAAAGCCCGA TGTTCCGGCC 
ATGGCTTGGC TTTTTGGCTA TTTTGTGCTT TTTATCTTTA TTGGGGTGCC CATTGCCATG 
GCCTTAGGCC TTTCCGCTTT AGGGACGATT CTCTGTGCCA ATACGATGCC CATCGAGTAT 
ATATCACAAA TTTCCTTTAC CTCCATTGAT AGTTTTCCGA TTATGGCCAT TCCCTTTTTT 
GTGGCGGCAG GTGTCTTCAT GGGGGAAGGG GGATTATCCA AGCGGCTCTT AGGCCTGGCT 
GATGAACTCC TGGGGTCCTT TACCGGGGGC CTGGCCTTGG CTACGGTTGT CACCTGTATG 
TTTTTTGCGG CGATCAGCGG CTCGGGGCCG GCTACGGTAG CTGCCATCGG CTCCCTGACC 
ATTCCGGCCA TGGTGGAAAG AGGGTATTCC CGGGCCTTTG CGGCGGCACT TGTGGCAGCG 
GCCGGCTCCA TCGGGGTGAT GATTCCTCCC AGCAACCCCT TTGTCGTTTA TGGTGTTTCC 
GCTCAGGTCT CCATTGGCAA ACTCTTTATG GGCGGGATTG TTCCCGGCTT GATCATTGGT 
TTGGTTTTAA TGGGCATCAG TTACTACTAT TCCAAAAAGA ACGGCTGGAA AGGCGAAGCC 
CGCAAACGTA CCTTTCGTAC AGTGGGCAAG GCTTTTTGGG AGGCCAAGTG GGCCTTGATG 
GTTCCGGTGA TAATTTTAGG CGGGATTTAT TCCGGGTACA TGACCCCTAC CGAATCGGCG 
GCTGTGGCAG CCTTTTATGG ACTGATCGTC GGTGTTTTCA TCCACAAAGG GATTAACCGC 
AAGAATATTG TCTATTGCTT CACGGAATCC TGCAGTACCT CCGCCGTCAT TATTGCCTTG 
ATGGCCATGG CCACGATCTT CGGTAATATT TTGACGATTG AACAGATTCC CACCAAAATC 
GCCACCTGGA TGCTGGCGAT AACCGACAGC AAATACGTTA TTCTCCTGAT CATTACCCTA 
TTGCTGCTCT TCGTGGGAAC CTTCATGGAA GCTTTGGCGG CGATTGTTAT TCTTACCCCG 
ATTTTACTGC CGATTGTCCT TCAGGTGGGT ATCGATCCGA TTCACTTCGG AATCATTATG 
GTGGTCAACC TGGCGATCGG CTTCATTACA CCACCGGTTG GTGTGAACCT GTTTGTGGCA 
AGCGGTTTGG CGAAGCTGAA GATCGAAGAG ATATCCAAAG CGGTGGTCCC CTTCCTCTTA 
GGCATGATCG CCGTACTGTT GCTGATTTCT TATGTGCCTT CCATTTCCAT GTTCCTGACT 
CAATTTGTGA AGTAA 

 

Protein sequence

MLDIAKNPEN SWKKWLRWID GNFEKPFLVI GMLAIIMLIT YQTLYRYIVS NITGGTAIVG 
LEELARFIFI WITYLAIPLA IKGRNNIRVD ILYDRISDRW QKISWIMVDS CILVLTGVIF 
FMGIDHLQMM LNYPQTSPAL NIPFFFPYLI LPIGFGLMSI RCIQDLVKQA LEIGLKDTLI 
GVLVTAAIFS PLFLKPDVPA MAWLFGYFVL FIFIGVPIAM ALGLSALGTI LCANTMPIEY 
ISQISFTSID SFPIMAIPFF VAAGVFMGEG GLSKRLLGLA DELLGSFTGG LALATVVTCM 
FFAAISGSGP ATVAAIGSLT IPAMVERGYS RAFAAALVAA AGSIGVMIPP SNPFVVYGVS 
AQVSIGKLFM GGIVPGLIIG LVLMGISYYY SKKNGWKGEA RKRTFRTVGK AFWEAKWALM 
VPVIILGGIY SGYMTPTESA AVAAFYGLIV GVFIHKGINR KNIVYCFTES CSTSAVIIAL 
MAMATIFGNI LTIEQIPTKI ATWMLAITDS KYVILLIITL LLLFVGTFME ALAAIVILTP 
ILLPIVLQVG IDPIHFGIIM VVNLAIGFIT PPVGVNLFVA SGLAKLKIEE ISKAVVPFLL 
GMIAVLLLIS YVPSISMFLT QFVK