| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0267 |
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| Symbol | |
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| ID | 7257232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 297980 |
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| End bp | 301441 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643560185 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_002456771 |
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| Protein GI | 219666336 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.249441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTTTCC AAGAATCAGC ACCGAAAGCC TGGCTGAAAG CCAATTTAAC ACCCAATGCC
CGGGTCATTC TGGAAAAACG CTATCTCAAG CAAGAGAATG GCGAAGTTGC GGAAAGCCCG
GAAGATATGC TTTATCGGGT CGCCAGCATC ATAGCCCAAG TGGAGGAGAC CTTTGGCAAA
ACCAAAAAAG AAGTCAAAGA ACTGGCCAAA TCCTTCTATG AGATGATGGC TAAACTGGAG
TTTATGCCTA ATTCCCCAAC CTTAATGAAT GCAGGACGTG ATCTGGGTCA ACTCAGCGCC
TGCTTTGTTT TGCCTGTGGA AGATAGTATG GAGGAAATTT TCGATGCCAT AAAAAGCGCA
GCGATTATTC ATAAATCCGG CGGTGGAACA GGCTTTAGCT TCTCCCGCCT CCGCCCCAAA
AACAGCACGG TCCGTTCCAC CGGCGGAGTG GCCTCCGGCC CTGTGTCTTT TATGAAGGTC
TTCAACGCAG CCACTGAAGC CGTGAAGCAG GGCGGGACCC GCCGTGGAGC CAATATGGGA
ATCCTGCGGG TGGATCATCC GGATATTCGG GAATTCATCA CCTGCAAGGA AGACAATAAA
GAGATTACCA ATTTCAATAT TTCCGTAGGG ATTACGGAAG AGTTTATGAA AGCAGTCCAG
GAAAAACGCC ATTATAACCT GATCGACCCT CATACCAAGG AAGCCGATGG ACAGCTTTAT
GCACCTGAAG TCTTCCAATT GATCGTAGAT CATGCCTGGA GAAATGGTGA GCCGGGAATC
ATTTTCCTGG ATCGTCTGAA CCGGGACAAC CCTACCCCTC AGTTAGGTGA GATCGAAGCT
ACCAATCCCT GCGTAACCGG AGATACTTGG GTTCTTACAG AGGAAGGAGC TGCTCAGGTT
AGGGATCTCC TGGGCAGTCA GGTTAAATTA GCCCTTAACG GCGAATATCA TGAGACATCA
AAGGAAGGAT TTTTCGCAAC AGGGGTCAAA CAGGTTCTGA CCCTAAAGAC CCAACAAGGA
TATGAATTAA AGGTGACAGC GGATCATCTG GTCCGTGTTG CTTCAGATAT GACCCGTTAT
AAAGTAACCC AGGAATGGAA GCCGGCTGGG GAACTCAAGC CTGGGGACAC CATCGTCCTT
TCCAATAACC GTAGTATTCA ATGGCAAGGG AAAGGAACAA AGGAAGAGGG ATATCTGCTT
GGTCTTCTTC TCGGAGATGG AACCCTTAAG GAAGAGGGAG CGGTTATCTC TGTCTGGGGT
GAGGGAGAAG AGGCAAAGTC CATGATGGAA GCTGCGGAAA AGGCGGCCTT TAGTTTAACT
CATCGCCAAG ACTTCCAAGG CTTCCAAAAG GAAATCAGCG AGAGACATGA ACATCGGATG
AGGTTTGCGG CCTTAAGGGA TCTTGCCCAG CAGTATGGGA TTCTTCCCGG CAGTAAAGCA
ATCACTCAGG AATTAGAAAA GACAGGGCAG GATTTTTATC AGGGACTGTT GCGAGGGCTC
TACGATACAG ATGGCACGGT AACAGGAACT CAGGAAAAAG GCGTATCGGT CCGGCTCTGG
CAAACCGATC TGGCAGGGCT TAAGGTCGTA CAACGGATGC TTCAACGCCT GGGTATCATT
TCCACACTTT ATGAGGAGCG TAAACCAGCC GGGCAAAAGC TTATGCCCGA TGGTCAAGGA
GGCTCTAAAG AGTACCCAGT ACAGGCGGGG CATGAATTGG TTATCTCCCA GGACAACATA
GAAATCTTTG CCGAAAAGGT TGGGTTCAGC AACTCGAAGA AGGCCCAGCT TCTTGCCGAG
AAGCTCAATG TCTATCAACG TTCCTTAAAC AGAGAACGTT TTGTTGACAA CATCGTGGCC
TGTGTCCCTG GCGATGCAGA GGAGGTCTTT GACGCCCAGG TTCCGGGGAT CAACGCTTTT
GATGCCAATG GCATCTATGT TCATAATTGC GGCGAGCAAC CCCTGCTTCC CAACGAAGCC
TGCAACCTGG GTTCGATTAA CCTTAAACTC ATGGTTACTG AGAAAAACGG CAAAGTCGTA
GTGGACTGGG AGCGCTTAGG GCAGATTACC CGTCTGGCTA CCCGTTTCCT GGATAATGTC
ATTGAAGCCA ACACCTACCC CCTTCCGTCC ATCGAAGAGA TGGTGAAAGG CAATCGCAAG
ATCGGTCTGG GCGTTATGGG CTTTGCGGAT ATGCTGATTC TTCTTCAGAC CTCCTATGCT
TCAGAGGATG CCGTGGAGTA TGCCGAAAAG GTCATGAACT TCATTCAGAC TGAGGCCCGC
CTGGAGTCCC AGCGTCTGGC TGAAGAGAGA GGCACTTTCC CCAACTATCA AGGCTCCATC
TATGATGGCG TCCGTCCTCT GCGCAATGCC ACCTTAACTA CCATCGCGCC TACAGGAACC
ATCTCCATGA TCTGCGGTGC TTCCAGCGGA GTGGAGCCCC TCTTTGCGGT GGCTTATACC
AAGACGGTCA TGGATGGGAC ACCCTTAATC GAAGTCAACC CCATCTTCCA AAGCCTTGCT
GAAGACTATG GTTTTAACTC CCCGGAGCTT ATGCGCAAGA TTGCGGAGAA AGGGACTGTC
CTGGGCTTCC CGGAAGTGCC AAACTGGGTG CAGGAGGTCT TTGTCACTGC TCAGGAGATC
GAGCCCGAAT GGCATATCCG CATTCAGGCT GCCTTTCAAA AATACACAGA TAATGCCGTT
TCCAAGACCA TTAACTTTGC TAATGAAGCT ACCCATGAAG ATATCGCTAA AGCTTATGAG
CTGGCCCATG AACTCAACTG CAAAGGTCTA ACCGTTTATC GGGACGGCAG CCGGGAAGAA
CAAGTTCTCT CCACAGGAAT CACCAAGAAG GCTGAAGAAA AGGCTGAGGA AGCCAAGACA
CAAGTATCCA TTCCTAAGGT GCCTTTCATT CCGGAAGTGA ATACCGTATT GCCCCGTCCC
CGTCCCACGA CCACCACAGG AGTTACCGAG AAGATCCGCA TTGGCTGCGG TAATCTCTAT
GTCAGTGTTA TGGCTGATGA GAAGGGAATC TGCGAGATCT TCACCAACAC CGGGCGGGCC
GGAGGCTGCT CCTCCCAATC CGAGGCTACA GCCCGCTTGA TCTCTATCGC CCTTCGTTCC
GGAATTTCTG TGGATGCCAT CATTGAGCAG GTCAAAGGTA TTCGCTGCCC CGCCTGCATT
CGCCGGGAAG GGGTTAATGT CACCTCCTGC CCCGATGCTA TCGCCCGTGT GATTAAGGAA
TATGTAGAAC TGGGTAAAGG CAAGGTTAAT TCCGTAAAGG TTACTTCTCA GCCGGCAGTG
GAAGAAAAAC CGGTACAAAG CAAGAGCGCT TCCATCACCA ACCCCCAAAA GACCCGAGCC
ACAGTAGCTG AAGGCAATGC CTGCCCTGAA TGCGGTATGA GCATCAATCA CGAAAGCGGC
TGTGTCGTCT GCACCCACTG CGGATACTCT AAATGCGGGT AA
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| Protein sequence | MSFQESAPKA WLKANLTPNA RVILEKRYLK QENGEVAESP EDMLYRVASI IAQVEETFGK
TKKEVKELAK SFYEMMAKLE FMPNSPTLMN AGRDLGQLSA CFVLPVEDSM EEIFDAIKSA
AIIHKSGGGT GFSFSRLRPK NSTVRSTGGV ASGPVSFMKV FNAATEAVKQ GGTRRGANMG
ILRVDHPDIR EFITCKEDNK EITNFNISVG ITEEFMKAVQ EKRHYNLIDP HTKEADGQLY
APEVFQLIVD HAWRNGEPGI IFLDRLNRDN PTPQLGEIEA TNPCVTGDTW VLTEEGAAQV
RDLLGSQVKL ALNGEYHETS KEGFFATGVK QVLTLKTQQG YELKVTADHL VRVASDMTRY
KVTQEWKPAG ELKPGDTIVL SNNRSIQWQG KGTKEEGYLL GLLLGDGTLK EEGAVISVWG
EGEEAKSMME AAEKAAFSLT HRQDFQGFQK EISERHEHRM RFAALRDLAQ QYGILPGSKA
ITQELEKTGQ DFYQGLLRGL YDTDGTVTGT QEKGVSVRLW QTDLAGLKVV QRMLQRLGII
STLYEERKPA GQKLMPDGQG GSKEYPVQAG HELVISQDNI EIFAEKVGFS NSKKAQLLAE
KLNVYQRSLN RERFVDNIVA CVPGDAEEVF DAQVPGINAF DANGIYVHNC GEQPLLPNEA
CNLGSINLKL MVTEKNGKVV VDWERLGQIT RLATRFLDNV IEANTYPLPS IEEMVKGNRK
IGLGVMGFAD MLILLQTSYA SEDAVEYAEK VMNFIQTEAR LESQRLAEER GTFPNYQGSI
YDGVRPLRNA TLTTIAPTGT ISMICGASSG VEPLFAVAYT KTVMDGTPLI EVNPIFQSLA
EDYGFNSPEL MRKIAEKGTV LGFPEVPNWV QEVFVTAQEI EPEWHIRIQA AFQKYTDNAV
SKTINFANEA THEDIAKAYE LAHELNCKGL TVYRDGSREE QVLSTGITKK AEEKAEEAKT
QVSIPKVPFI PEVNTVLPRP RPTTTTGVTE KIRIGCGNLY VSVMADEKGI CEIFTNTGRA
GGCSSQSEAT ARLISIALRS GISVDAIIEQ VKGIRCPACI RREGVNVTSC PDAIARVIKE
YVELGKGKVN SVKVTSQPAV EEKPVQSKSA SITNPQKTRA TVAEGNACPE CGMSINHESG
CVVCTHCGYS KCG
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