| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0235 |
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| Symbol | |
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| ID | 7257196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 259121 |
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| End bp | 261763 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643560149 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_002456739 |
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| Protein GI | 219666304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCTC CCCCAAAAAG AACCCCATCG AAAAGGCCTC GAAAGAAGAA ACGTGTTTCG
AAGTTGCGGG TCTTTTTAGT GAGTTTTGGC TCCGTATTCA CATTGGCTTG TATAGCCTTA
TTGATTTATG TTCTGTACGT TGTCGCTGGA ACTCCGGATT GGCATCCCGA TACCTTGACC
AACCAAAAAC AAACATCCTT TGTTTATGAT ATGGACGGGA ATCAAATTGC TGAGCTCCAT
GCCGCGGAGA ATCGCCAGAT GGTGGATTCA TCAGAGATTC CTCAGCTTGT GAAGGATACC
TTTGTAGCTG TGGAAGACAA ACGGTTTAAC GATCATTTTG GTGTGGATCC CATCCGTATT
GTGGGTTCCT TTATTGCTGA CTTAAAAAGT CAGTCCTGGA AAGAAGGTGC CAGCACCATC
ACCATGCAGC TGGCCAACAA TGCTTTCATT GAGAACCCCC GGGAAAAAAC CCTGGTTCGC
AAGCTCCAAC AAGCAGCTCT GGCGATCCAA TTAGAACGGG AGTACACCAA AGATGAAATC
CTCACCTTCT ATCTTAACCG TATCTTTTTT GGTGAATCCT CTTTCGGTAT TCAAGCTGCC
GCCAAGACCT ATTTCGGCAA AGATCTTAAG GCCCTAAATC CTGACGAAAT CGCCCTTCTT
GCCGGATTAC CCCAGGCTCC CAGCGGCTAT AACCCTTATT ATCATCCTGA AGAAGCTAAA
AAACGCCGGA CCATCGTCCT GGGTGTAATG AAAGACTCAG GCCTCATCAC AGCCGATGAG
TATGACCAAT ATAAAGATGC ACCTTTTGAG CATGTGGAAA ATGTCAAAGC CAACCGAGCC
GAATCTGAAA AGCCGGTAGT CGCCGGCACC AATTATCAAT ATCCTTATTT CGTTGATCAT
GTGATCGAAG AGCTCATCAA TGAGCACGGC CTTACAGAAG ACCAAATCTT CAACGGCGGC
TTGAGAATCT ATACCACGGT GGATACAAAG ATTCAGGCAG CAGCAGAGAA GGAATTTGCC
AATGCCGCCA ACTTCCCACA AAGTGTGGAT GAAACCCTTG TTCAAGGTGC TATGACCGTT
CTCGATCCCA AGACAGGTGC TATTCGAGCT TTAGTAGGCG GCCGGGATCA CAACACAGCC
CGGGGATTCA ATCGAGCCAC TCGAGCCAGC CGCCAACCCG GTTCAACCGT TAAGCCTCTG
GTTGTTTATG CCCCAGCTCT TGAAAAAGGC GGCTTTTTCC CAGGCACAGT CCTGGATGAT
ATGCCCGTTA AATATAATGC CGGCAATGGT CAAGTATGGG CTCCCGTCAA CTACGATACC
GAATATGCGG GCTGGCGCGG TCTCATCACC ATGCGTTTTG CTGTGCAGAA CTCTGTCAAC
GTCTACGCGG TCAAACTCAT GAACCTGGTA GGTATTGAAT ACAGTTGGAA CTTTGCCAAA
AACAGTCTCG GACTTCCCCT AGAAGAAGGC GATAAAGTAC TGAGCTTAGC TCTAGGAACC
AATCAGATGT CCACCTTAGA TATGGCTTCC GCCTATGGCG TGTTTGCCAA TAACGGAGTT
CGAGTAGCCC CTCATGCGAT AGAAAAAGTT CAGGATGCCA ACGGCAAAGA AGTCCTCGTT
CCGCAAGTTA CCAAGGAACG GACCATGAAG GAAACCACCG CTTACCTTAT GAACAGCATG
CTGCGCAGCG TCGTCACCGG CGGAACAGGA ACTCGGGCTC AGATTGGCAA TTGGGCTGTT
GCCGGTAAGA CAGGCACTAC CTCTCTGGAT CCGGATATTT ACGGTTACCG CACCGGGAAT
CCGGATGCCT GGTTCGCAGG CTATACGCCC GAATATGTAG GTGTGGTCTG GATGGGCTAT
GACAAAGATG ATGAAACCTT AACTCACTAT CTTCACAAAG TTTACGGCGG CCAGTACCCT
GCCCAAATCT GGAAGAATGT TATGACCGCA GCTCATGAAG GCTTGACCGT ACAGACAGAA
TTCCAGCAGC CTTCCGGCAT TGTCGGCGGT GACTTCGATA CTAAATCCGG ATTAATACCC
AGCAGTCTGA CTCCCAAGGA TTTTATCCGC AGAGAAATTG CCGCTCAAGG TGATTTCCCC
ACCCGTGTCA GTGATGTTTG GGTAGAAAAA GAAATTGATA AAGATCACCC AGAATATCTC
GCAGGCACAG GTACCGTTAA TAAAGAGAAA AAAGTATTCC TGAACATCAC CGGTCGTGAT
TCCGAGACTC CTTGGCCAAG CGACGAACAG CCTTACAAAA TGCCCGAAAA AGAGTATAAC
GAAACGCCAC CTCCCAATGA GACGACTTCC CCGCCGGCAG GGGATCCCAG TATCCCGATC
CCGACCCTGG GAGCTGTGGC TTATGATGCA GCCCAGAGCT CGGTGACCAT CCCTGTCGCC
TACCCCGAAG GAAGCGAAGG GCTCCACCTT ATCGTTTATG TAAAATTCCC TGACCATGAT
TTTGTTCAGC CTTTCTCCCC CGATGCCCAG CCTGGAGGAT CGAATCAGAT TCATATTCCA
TTAAGCATAG AGGGAGAACC TATCTCACCG GGTAACTATA GTTTCTGGGC ATGCTTACAA
AGCCCTGAAA CCGGAGCAAC CGGTAACCCT TCCCCAGTGG CTGTCTTAAC CATTACAGAC
TAA
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| Protein sequence | MASPPKRTPS KRPRKKKRVS KLRVFLVSFG SVFTLACIAL LIYVLYVVAG TPDWHPDTLT
NQKQTSFVYD MDGNQIAELH AAENRQMVDS SEIPQLVKDT FVAVEDKRFN DHFGVDPIRI
VGSFIADLKS QSWKEGASTI TMQLANNAFI ENPREKTLVR KLQQAALAIQ LEREYTKDEI
LTFYLNRIFF GESSFGIQAA AKTYFGKDLK ALNPDEIALL AGLPQAPSGY NPYYHPEEAK
KRRTIVLGVM KDSGLITADE YDQYKDAPFE HVENVKANRA ESEKPVVAGT NYQYPYFVDH
VIEELINEHG LTEDQIFNGG LRIYTTVDTK IQAAAEKEFA NAANFPQSVD ETLVQGAMTV
LDPKTGAIRA LVGGRDHNTA RGFNRATRAS RQPGSTVKPL VVYAPALEKG GFFPGTVLDD
MPVKYNAGNG QVWAPVNYDT EYAGWRGLIT MRFAVQNSVN VYAVKLMNLV GIEYSWNFAK
NSLGLPLEEG DKVLSLALGT NQMSTLDMAS AYGVFANNGV RVAPHAIEKV QDANGKEVLV
PQVTKERTMK ETTAYLMNSM LRSVVTGGTG TRAQIGNWAV AGKTGTTSLD PDIYGYRTGN
PDAWFAGYTP EYVGVVWMGY DKDDETLTHY LHKVYGGQYP AQIWKNVMTA AHEGLTVQTE
FQQPSGIVGG DFDTKSGLIP SSLTPKDFIR REIAAQGDFP TRVSDVWVEK EIDKDHPEYL
AGTGTVNKEK KVFLNITGRD SETPWPSDEQ PYKMPEKEYN ETPPPNETTS PPAGDPSIPI
PTLGAVAYDA AQSSVTIPVA YPEGSEGLHL IVYVKFPDHD FVQPFSPDAQ PGGSNQIHIP
LSIEGEPISP GNYSFWACLQ SPETGATGNP SPVAVLTITD
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