| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0229 |
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| Symbol | |
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| ID | 7257190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 248898 |
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| End bp | 251516 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643560143 |
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| Product | peptidase U32 |
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| Protein accession | YP_002456733 |
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| Protein GI | 219666298 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.277324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACACA TTAAGGATGC GGAGTTATCT TCTATGGAGC TCTTAGCTCC GGCGGGGAGT
TATGAGTCTT TTAAAGCTGC TGTAGAGAAT GGGGCCGATG CGGTGTATCT GGGGGGAAAG
AGCTTTAATG CCCGGGCCAG TGCCGCTAAT TTTGGCCTGG ATGAGTTGCG GCAGGTGGTG
CAGTATGCCC ATGAGCGGGA GACGAAGGTT TATGTGACGG TGAATATTTT GATTGCCGAT
CAGGAGTTTC CTGAGCTTTA CGATTATATT TACAGCTTAT ACGAGATTGG GGTGGATGCC
CTGATCCTTC AGGATATTGG CGTAGGGTCA ATGATCCGGA GCGTTTTGCC GGAGATGGAG
CGCCATGCCA GTACCCAGAT GACCATCAAT ACAACCTGGG GTGTTCGTCA TGTAGAAAGA
CTGGGCTTTC AACGAGTGGT CCTGGCCCGG GAAGTGTCGG TTGAGCAGAT GAAAACCATT
TCTGCCAAAA CAGCTCTGGA GATAGAGGTG TTTGTCCATG GGGCCTTGTG TATTTGCTAC
TCGGGGCAAT GCTTGATGTC CAGTTATATC GGGGGCCGAA GCGGCAACCG GGGAAGATGC
GCTCAACCTT GCCGGCTGAC CTACCAACTG ATGAATGAAG AGAGAAAAGA TCTGCTGGCT
GAGGCTAACC TAGGCAATCA CCTCCTAAGT CCGCGGGATT TGAACTTTGT GGAGGAGATT
CATACTTTAA AAGAGTGTGG GGTCTACTCC TTGAAAGTGG AAGGACGGAT GAAAAGGCCG
GAGTATGTGG CTACGGTCAC TCGTATTTAT CGTCGTGCTC TGGATCACGT GCTTTCCCAA
GAAAATGGCG TAAACGCTGG GTCAGCGGTG ACAGGGGAAG AAAAGACCGA ACTTTTACAG
ATTTTTAACC GGGATTTTTC TCGGGCTTAT TTCCATAGTC ACCCTGGAGC GGAGTTGATG
AGCTATGCCC GCCCCAACAA TAGAGGGATT CGTCTGGGCA GGATTGTTCA GAATAGGGGC
AATCAGCTGG AGATTAAACT GGAGGCGTAT CTCAGACCCG GTGATGGAAT TGAGGTCTGG
ACAAGCCGGG GCCGGGAAGG GATCACGGTC CAGAAGGTTT GGCAAGGCAA GAGGGAGAGC
GAGGAAGGGA AGCCGGGAGA TATCGTTCAG ATCGAGTTTG CGGGCAAATC CCACCCCGGA
GATCGGGTAT TTAAAACTCA TGATGAGCAA TTGATGGAAA AAGCCCGCCA GAGTTTCCAG
GAGGGTAAGG AGCGGCGCAA GCGCCCTTTG AAAATGCGCC TATCCGGCTC CATCGGAGAG
CTTATGGCCT TAGAGGCTTG GGATCAGGAC AAACATGTCC GGGTAGATTC AGCTACCCCG
GCTCAGCAGG CTATGAAGCG CCCCTTAACT CAGGAGTACG CCTTCCAACA GCTAAATCGT
CTGGGTACAA CACCTTTTTG GTTGGAAGAG TTGGACCTGG AGGTGGAGGA AGGACTTATG
CTTCCGGTCA GTGAACTCAA TGAGATGAGA AGGCTTGTAG TTGAAGGCTT GCTCCATAAG
TCTTTCCAGC AAGAAAAAGT TACCAGAGGG GAATATAAGC AGCGCCTGAA GGAATGGCAA
AATCGCCTTA AGCTTGAGCA AGAGGAGCAG GTTCAGCAAG CTCAGCAACA TAAAGAGCCG
CTGCCCGGAA GTCATAGCAA AGCTGCTTCT TTAGCAGCAA GGCGCTTGAC TGTTGCCGTC
AGCGATCTGG AGGGAGTAAA GGCGGCTTTA AAGGCTGGGG CAAGGCGAAT TGCTCTGGGT
GGGGAGCGTT GGCGTTCCCG CAAGGGGATG AGTTGGGAGG ACATCCGGGC CGGTGTAAGG
CTTTGCAAAG AACAGGGAGC AAACTGCCTT TTGCGCCTGC CGCGGATTTT AAACGAAGAG
CAAAGTGCTT GGTGGTATGA GGCTTTGCTT AAGGTAAAGG CCTGGGAGGA TCGTCCCTGG
ATCATGGTCG CGAACTTGGG AGAGCTGGAA ATGGTGAAGG ATATCGATCC GGACTGGCCT
TTTGAGGTGG ATTACCCTGT CAACATCTTT AATGAGGCCG CGGTGGCCCA TCTATTCCGT
TTAGGGGCCC AAGGGGTGAC CCTGTCTACA GAGCTTGAAC ATAGCCAGAT TGAGCCTCTG
GCCCGTTGGC CCAAGACAGA AGTCTTTGCC TTTGGGGAGC TGGAGATGAT GGTCAGTGAG
TATTGCCCTG TAGGTGCCAC ATTGGGAGGC AAAAAAGGAA CAAAATGTAC GGCGCCCTGT
GTGAAGGAAC CCCATTATTT GAGAGATCGG CTCAACTATG ACTTCCCCAT CGAAACAGAT
TTGGATTGTC GGATGCATCT TTATAATGTG AAGCGCTTGA ATCTTTACAA GGAATTGGGG
AGCATTGCCA AAATGGGTGT TCAACGGATT CGTTTGCAGC TGGATCGGGC CAATCCTGTC
CAGATTCGCG ATACGGTACG AGTCTTTCTT GAAGGTTGGG AGAGGGCACT TGCAGGGGAG
CGCATCTCAG AGGAGCAGGC CGAAAAGGTC AATGGATACT TGGCAGAGCG TTTCCCGGAA
GGGTTTACCA AAGGACATTA TTTTAGAGGA GTGCTTTAA
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| Protein sequence | MSHIKDAELS SMELLAPAGS YESFKAAVEN GADAVYLGGK SFNARASAAN FGLDELRQVV
QYAHERETKV YVTVNILIAD QEFPELYDYI YSLYEIGVDA LILQDIGVGS MIRSVLPEME
RHASTQMTIN TTWGVRHVER LGFQRVVLAR EVSVEQMKTI SAKTALEIEV FVHGALCICY
SGQCLMSSYI GGRSGNRGRC AQPCRLTYQL MNEERKDLLA EANLGNHLLS PRDLNFVEEI
HTLKECGVYS LKVEGRMKRP EYVATVTRIY RRALDHVLSQ ENGVNAGSAV TGEEKTELLQ
IFNRDFSRAY FHSHPGAELM SYARPNNRGI RLGRIVQNRG NQLEIKLEAY LRPGDGIEVW
TSRGREGITV QKVWQGKRES EEGKPGDIVQ IEFAGKSHPG DRVFKTHDEQ LMEKARQSFQ
EGKERRKRPL KMRLSGSIGE LMALEAWDQD KHVRVDSATP AQQAMKRPLT QEYAFQQLNR
LGTTPFWLEE LDLEVEEGLM LPVSELNEMR RLVVEGLLHK SFQQEKVTRG EYKQRLKEWQ
NRLKLEQEEQ VQQAQQHKEP LPGSHSKAAS LAARRLTVAV SDLEGVKAAL KAGARRIALG
GERWRSRKGM SWEDIRAGVR LCKEQGANCL LRLPRILNEE QSAWWYEALL KVKAWEDRPW
IMVANLGELE MVKDIDPDWP FEVDYPVNIF NEAAVAHLFR LGAQGVTLST ELEHSQIEPL
ARWPKTEVFA FGELEMMVSE YCPVGATLGG KKGTKCTAPC VKEPHYLRDR LNYDFPIETD
LDCRMHLYNV KRLNLYKELG SIAKMGVQRI RLQLDRANPV QIRDTVRVFL EGWERALAGE
RISEEQAEKV NGYLAERFPE GFTKGHYFRG VL
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