Gene Dhaf_0201 details

Gene Information

• Locus tag: Dhaf_0201
• ID: 7257162
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 224824
• End bp: 225537
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643560115
• Product: ABC transporter related
• Protein accession: YP_002456705
• Protein GI: 219666270
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 61
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATAT CGTTAAAAAA CATTACACAC TACTACCGGG ATGGGACGGG AGATCAGGTT 
ACCCCCCTAA GAAACATTGA CTTAACTATG AGGAGCGGGG ATTCTCTCGT GCTCTATGGG 
CCGTCAGGTT GTGGCAAGAG TACGCTGTTG TTTATCCTGG GTTGCCTGTT AAGACCCTCG 
GAAGGACAGG TGGATATAGA CGGGCGTTCC CTCCTCCACT ATGGGGAAAA AGAGTTAGCC 
GAATTGAGAA ATCGGAAGAT GGGCTTCATG TTCCAGGCGT GCTATCTGCT TCCCACCTTG 
ACCGTCAAGG AAAATATCAT GCTTCCTTTC TGGATTCAGG GAGGGAAAGC AAGGGATGGC 
AGGACGGAAA AGAAAACGGT TGAGCTTTTG CTGGAACAGC TGGAGTTGAC GGAACGGGCT 
GATTTTTTAC CTTATCAGTT AAGCGGCGGC CAGAGGCGCC GGGTGGCTAT GGCCAGGGCT 
TTGGCTAATG ACCCGGAGGT GATTCTGGCT GATGAACCCA CGGCGGAACT TGATGAGGAG 
AAAAAGGACT TTGTGGGAAA GTGGCTGGGG GAGCAGGCCG GAAAAAAGAA GATTGTTGTG 
GTTGCTACTC ACGATCCGCA ATTAGCGGTT TATGCCGGAC GGGTTTATAG CTTAAGTCAG 
GGGCAGTTAC AGGAAAAGAT TTTGGGAAAG GGAGCCGTTT ATAGCTCAGG ATAG 

 

Protein sequence

MEISLKNITH YYRDGTGDQV TPLRNIDLTM RSGDSLVLYG PSGCGKSTLL FILGCLLRPS 
EGQVDIDGRS LLHYGEKELA ELRNRKMGFM FQACYLLPTL TVKENIMLPF WIQGGKARDG 
RTEKKTVELL LEQLELTERA DFLPYQLSGG QRRRVAMARA LANDPEVILA DEPTAELDEE 
KKDFVGKWLG EQAGKKKIVV VATHDPQLAV YAGRVYSLSQ GQLQEKILGK GAVYSSG