Gene Dhaf_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0197 
Symbol 
ID7257158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp219984 
End bp221294 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content44% 
IMG OID643560111 
Producthistidine kinase 
Protein accessionYP_002456701 
Protein GI219666266 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGATA GGATGGATGT AAAGCAAAAT ACGGCCTTAT CTTCTGAAGA AGAACTAAAA 
AAACAGATTG CTGCCCTTCA CAAAATAAAC AATATGACGG GTTTTTTGCC CATAAAAATA
GAAGAGCTGC TGCCGGCCAT CAAAGAAGTG ATGGAAGATA TTTTTGCTGA TTACCAATGC
AATTTCAATA TATTTCCCAA AAGACATGGT TGCAACAGGT TGGAGCTAGG GGACTGTAAG
GCGATACGGG ATCAGTTGCC GATGATTTCT GATCAGGATC AGACTTGTCC CTGTTGTACC
GGAGAAGCTT GCCGGGGCAT TTTTCATTCC CATGTTTGTG TGCCCTTGGT TTCAGGTAAG
GAAGTATTTG GAGTGATGAC CCTTAAAAGC CTCCTTAAGG TAAGATTAAG CCGGGATTCG
CTAGAAATGC TCTTAGCCAT TGCCAACCAA GTGGCGGCGA CCCTTCAGCG CTCTCAATTA
TTGAATCGCC TGGCCCAAGA GAAGAACAAT CTTGAAGAGG CTAATCAAGA AATCACTCAG
CTCAATAGGT CATTGTTCGA CACCATTAAG GAGCTGGAAA AGACTCAGCG TCAACTGATT
TATTCTGAGC GGTTAGCCGC TGCAGGTAGA TTAGCAGCTA ACCTTACCCA CGAGATCAAC
AATCCCACTG GAATCATTTT GTCCAGGTTG GAATGGCTCC TTTTAGAGGC TCCGGAAACA
GAATTGCCTG AAGAGGTCGT CAAAGATTTG CTGGTTATCA AAAAGCATAC AGAACGGATC
GCTCAGACCA CCCGAGGATT GCTCTCTTTT TCCAGGCGAA CGAAAAATGA AACAACTTTA
GTTGATCTTG AGAATTTGAT CAAGGAAACG GTGGTTTGGC TGGAAAGACA GTTTTCCCGC
AAGGATATCA TCATTGTCCT CAACCTTAGC CGCCTGCCAA CCGTTATCGG CAACAAAGAC
CAACTGGAGC AAGTACTTGT CAATATCTTG ACCAATGCCA AAGATGCCCT GCCGGAAGGA
GGCAAGATCA AGATTACCAC GAAATATGAT ACCGAGAAAA ATAATGTTCA AATAGATATT
GAGGATAATG GCACGGGAAT ACCGGAAGAC ATGATGAATA GTATTTTTGA CCCCTTTTTT
AGTACAAAAG AAAAAGAGCT GGGCACAGGG TTGGGATTGC CGATCAGCTT GACCATTATG
AAAGAGCATG GCGGCTTTCT GCGCATGGAG AGCACTCCCC ATGAGGGCAG TTGCTTTAGT
ATGATTTTAC CCTGTGTACC GGAGAACCAG GAGGGTGATT TGAATGAGTG A
 
Protein sequence
MCDRMDVKQN TALSSEEELK KQIAALHKIN NMTGFLPIKI EELLPAIKEV MEDIFADYQC 
NFNIFPKRHG CNRLELGDCK AIRDQLPMIS DQDQTCPCCT GEACRGIFHS HVCVPLVSGK
EVFGVMTLKS LLKVRLSRDS LEMLLAIANQ VAATLQRSQL LNRLAQEKNN LEEANQEITQ
LNRSLFDTIK ELEKTQRQLI YSERLAAAGR LAANLTHEIN NPTGIILSRL EWLLLEAPET
ELPEEVVKDL LVIKKHTERI AQTTRGLLSF SRRTKNETTL VDLENLIKET VVWLERQFSR
KDIIIVLNLS RLPTVIGNKD QLEQVLVNIL TNAKDALPEG GKIKITTKYD TEKNNVQIDI
EDNGTGIPED MMNSIFDPFF STKEKELGTG LGLPISLTIM KEHGGFLRME STPHEGSCFS
MILPCVPENQ EGDLNE