| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0182 |
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| Symbol | |
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| ID | 7257143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 201135 |
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| End bp | 201989 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643560096 |
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| Product | spermidine synthase |
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| Protein accession | YP_002456686 |
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| Protein GI | 219666251 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000125359 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAT GGTATACAGA AGAGCATACG GAAAACGTTC GCTTTTCGAT TAAGGTGGAT
CGGCAGCTTT ATTCAGGACA GAGTGAGTTT CAAAGGATCG ATGTCTTTGA ATCCAAAGAG
TTTGGCACCT TTTTTACCCT GGATGGCTTG ATGATGGTGA CCCAAAAGGA TGAATTTATT
TATCACGATA TGATTGTTCA TGTTCCCATG GCGACCAACC CCCAAATTAA AGATGTTTTG
GTCATCGGGG CCGGGGATGG GGGAACCGTC CGCGAACTGA CCCGCTATGA CTCTATCGTC
AACATTGACA TGGTGGAAAT TGATAAACTG GTGGTGGATG TCTGTAAAGA GTATCTGCCC
CAGACGGCTT GCAAGCTGGA GGATCCGCGG GTTCGTTTGT TCTTTGAGGA TGGCTTGAGA
TTTATCCGGA CTAAAGAAAA CAGCTATGAT CTGATTATTG TAGACTCGAC GGATCCCTTT
GGTCCGGGGG AAGGTCTGTT TACAAAAGAG TTTTATGGCA ACTGCTATAA AGCCCTCAAG
GATGATGGCA TCCTGGTGAA TCAGCATGAG AGCCCTTATT ATGAAACCTA TGCCCAGAAC
ATGGGCCGGG CTCACCAAAG GATCAAAGAA TTTTTCCCCG TCTGCCGGGT CTATCAAGCT
CATATTCCCA CCTATCCTTC CGGACACTGG CTTTTCGGCT TTGCTTCGAA AAAGTATGAC
CCCTTGATCG ATATAGACGA GCAGGCCTGG AACGACTTAG GGATTAAAAC TCAATACTAT
AACACGGAGA TCCATAAAGG CTGCTTTGCT CTCCCCAATT ATGTCAAAGA ACAGCTGGCC
GATGCGGTGG AATAA
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| Protein sequence | MELWYTEEHT ENVRFSIKVD RQLYSGQSEF QRIDVFESKE FGTFFTLDGL MMVTQKDEFI
YHDMIVHVPM ATNPQIKDVL VIGAGDGGTV RELTRYDSIV NIDMVEIDKL VVDVCKEYLP
QTACKLEDPR VRLFFEDGLR FIRTKENSYD LIIVDSTDPF GPGEGLFTKE FYGNCYKALK
DDGILVNQHE SPYYETYAQN MGRAHQRIKE FFPVCRVYQA HIPTYPSGHW LFGFASKKYD
PLIDIDEQAW NDLGIKTQYY NTEIHKGCFA LPNYVKEQLA DAVE
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