Gene Dhaf_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0172 
Symbol 
ID7257126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp188169 
End bp189710 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content50% 
IMG OID643560079 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002456676 
Protein GI219666241 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG ATCATACAAA GGGCAAGTAT TATCTGGATA AAAGCCAGGG CACGCCACCC 
TCTTTTTGGC TGGATTCCAC ACCCAAGACC AACTACCCTT CTTTAACAGG TGATATCTCC
GTTGATGCTG TGGTAATCGG TGGGGGGATG GCCGGAATCA GCTCAGCTTA TCTTCTCACC
CAGGAAGGGC TTAAGGTGGC CGTACTGGAA ACAGACCGCA TCCTCCAGGG TACGACAGCC
TATACCACTG CCAAGCTCAC CTCCCAGCAC GGGCTTATCT ACGATAAGCT CCTGGGGCAG
ATGGGAGCGG AAAAAGCAAA ACAATATGCC GAAGCTAATG AATCCGCCAT AGAGTTCGTG
GCAAAGCTGG TGGAACGGGA GGCTATTGAC TGTGACTTTA CCCGGCAGCC GGCTTATATC
TACACTCAAC AGAATAAAAG CAAAGAGAAG CTGGAAAAGG AAATGAAAGC AGCTCAACAA
TGCGGGATTG ATGCTCATTA TGTCACTGAG CTGGACCTGC CTCTTGCCGT CAAGGGAGCT
TTGCGCTTTG ATCAGCAGGC CCAGTTCCAT CCTCGCAAAT ATCTTCTCGC CCTCGCCGGC
AAGATCGCGG AAAAGGGGGG GCATATTTTT GAACAGACTA AAGCTGTGGA TATCCGCGGA
GATGGTCCCT TTATAGTGCT AACCCAGCAA GGCAGCAGGG TAAAGGCCGA TTATGTGGTG
ATGGCTTGTC ATTATCCATT TAATATTTTA CCTGGCCTTT ACGTGTCCAG AATTTATCAG
GAAAGGGAAT ATGCTGTAGT CGTTAAAGCA AAGGAGGCAT TTCCCGGCGG AATGTACATT
AATGCGGAAG AGCCGGCCCG TTCCTTGAGG GGATTGCCGA CTCCTGATGG AGAGAGAATT
CTTATCGTTG GTGAAAAGCA TAGAACAGGA CATGGGAAAA ATCTGACTGA ACACTATAAA
AATCTCATGG AGTTTGCCCA AGGGCTTTTT ACTGTAGAGG AATTTCCCTA TTATTGGTCC
ACACAGGACT GCACCACCTT GGATGACCTG CCTTACATTG GGCCAATCAG CAGGAGCAAG
CCGAATCTAT TGATTGCCAC GGGATTTCGG AAATGGGGAA TGACCCATGG TACGGTAGCC
GCTTTAATTA TCCGGGATCG GATCGTAAGA GGAGCTTCCC CCTGGCAAGA GGTTTATGCT
CCCTCCCGGT CAATATCTTT GAATTTCGCA GCAAGTTTTA TGGCCAATAG TTCTTTGCTG
GCCTTTGATC TCGTTGCGGG AAAGCTCATG AGAGGGAAAG AAATCTATAG CTTAAGACCC
GGTGAGGCAG TGATTGCCAA TATGGATGGC CGTCGTGTGG GGCTTTATAT GGATTCTGAG
GCGAATCTGC ATCGGGTGGA TACCACCTGT CCCCATTTGG GTTGTGAGGT CCAGTGGAAT
GATGCAGAGC TGTCCTGGGA TTGCCCTTGC CACGGCTCCC GCTACGATGT GGATGGCAAT
CCCATCGAAG GACCAACCTT AAAGCCGTTG GCGAAATATT GA
 
Protein sequence
MKIDHTKGKY YLDKSQGTPP SFWLDSTPKT NYPSLTGDIS VDAVVIGGGM AGISSAYLLT 
QEGLKVAVLE TDRILQGTTA YTTAKLTSQH GLIYDKLLGQ MGAEKAKQYA EANESAIEFV
AKLVEREAID CDFTRQPAYI YTQQNKSKEK LEKEMKAAQQ CGIDAHYVTE LDLPLAVKGA
LRFDQQAQFH PRKYLLALAG KIAEKGGHIF EQTKAVDIRG DGPFIVLTQQ GSRVKADYVV
MACHYPFNIL PGLYVSRIYQ EREYAVVVKA KEAFPGGMYI NAEEPARSLR GLPTPDGERI
LIVGEKHRTG HGKNLTEHYK NLMEFAQGLF TVEEFPYYWS TQDCTTLDDL PYIGPISRSK
PNLLIATGFR KWGMTHGTVA ALIIRDRIVR GASPWQEVYA PSRSISLNFA ASFMANSSLL
AFDLVAGKLM RGKEIYSLRP GEAVIANMDG RRVGLYMDSE ANLHRVDTTC PHLGCEVQWN
DAELSWDCPC HGSRYDVDGN PIEGPTLKPL AKY