| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0165 |
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| Symbol | |
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| ID | 7257119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 179841 |
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| End bp | 181361 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643560072 |
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| Product | D-alanine--poly(phosphoribitol) ligase subunit 1 |
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| Protein accession | YP_002456669 |
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| Protein GI | 219666234 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR01734] D-alanine--poly(phosphoribitol) ligase, subunit 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000579194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCTCA TATCCAGAAT AGACAGCTAT GCTGAAAGCT GTCCTGATCG AGTGGCGCAT
CATTATAGGG AGAGCAGGCT TACCTATAGA CAATTAAAAG AAGCGTCCGA TGCTTTGGCC
TGTTACTTGA TTGAAACATT GAAAGACGAC AGAACGCCCA TTGTTGTTTA CGGTCATAAG
CAGCATGAAA TGCTCATTTG TTTTTTGGCT TGTGTAAAAT CCGGACATGC CTATATTCCT
GTGGATTTTT CTCTGCCCAG CCAACGAATA GAAGACATTA TTCAGAGCTC CCGGACCCGA
TTGATTCTCT CCCCTGGCGA GAGCCCGGAG CGGGAAGGGA TCAGGACGAT CCGATCAGAT
GCGATTAGCC GGTTGATCCG GTCCTATTTA GGCAAGTCTC CATCTAAAGA TTATCAAGTA
AAAGATCATG AAACCTATTA TATTATCTAC ACTTCAGGAA GCACAGGAAA ACCCAAAGGG
GTTCAGATAA CCCTGGCAAA TCTGGAGAGT TTTGTACATT GGGGTGTGGG AGTAGGGCGG
TTTCCTGAGG CTGAGGTGTT CCTGAACCAG GCTCCCTTTT CCTTTGATCT GTCGGTGATG
GATCTCTATC TGGCCCTCAC TTCCGGTTCT ACCCTCTATA GTATTGATAA GGCCATGATC
GCTGAACCTA AGGAGCTCTT CGCCTATTTC AAGCAATCTG GGCTAACGGT ATGGGTCTCT
ACGCCATCCT TTGCCGAGAT GTGCCTGGGA GACTCCAGCT TCAATGACGA ACTTCTTCCT
GACCTGAAAG TGTTTATGTT TTGTGGAGAG ACCTTGAGCA ATCAATGTGC GGAAAAATTA
TACCGGCGAT TTCCTCAAGG GAAGGTTATC AATTCATACG GCCCCACGGA AGCGACCGTA
GCGGTGACAG CTCTTATAGT GGATTTGGAG ATGTGCGCCA GGAAGGAGCC TCTGCCGGTA
GGAAGGGTTA AGGAGGATTG TCGCCTTCTC ATCGTGGATT CGGAAGGGGT TCCTCAGGAG
GAAGGGAGCC AGGGTGAAAT CGTCATCCTG GGGGCTAGTG TAAGCCCGGG CTACTATCGC
AATGAAGAAA TGACAGATAA GGCATTTTTC GCCCGATCCT GGGACGGGGA TGTGAAACGG
TGCTACCGGA CGGGGGATGA GGGCTATCTG AAAGAAGGTC TTCTTCATTA TGGAGGGAGA
ATCGACTTTC AGATCAAGCT GAATGGCTAT CGCATTGAGC TAGAGGATAT TGAAAATAAC
CTGCGCAAGG TGGAAGGGGT TGCCAATGCC ATCGTCCTGC CCATTAAAAA AGACGGGCGG
GTTCACTATC TGGCAGGAGT AGTCGTTCCG AACAAAAAGC TCGATAAAAG GGAGTTTGAG
ATAGGGCAGA TGATCAAAGC TGAATTAAAA AACTATCTGC CGGACTATAT GATTCCAAGG
AAAATCATGT TTAGGGATTC TTTGCCGATG ACGGTCAATG GCAAAGTGAA CCGGGCTGCA
CTTATGGAGG AATTTCAGTG A
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| Protein sequence | MNLISRIDSY AESCPDRVAH HYRESRLTYR QLKEASDALA CYLIETLKDD RTPIVVYGHK
QHEMLICFLA CVKSGHAYIP VDFSLPSQRI EDIIQSSRTR LILSPGESPE REGIRTIRSD
AISRLIRSYL GKSPSKDYQV KDHETYYIIY TSGSTGKPKG VQITLANLES FVHWGVGVGR
FPEAEVFLNQ APFSFDLSVM DLYLALTSGS TLYSIDKAMI AEPKELFAYF KQSGLTVWVS
TPSFAEMCLG DSSFNDELLP DLKVFMFCGE TLSNQCAEKL YRRFPQGKVI NSYGPTEATV
AVTALIVDLE MCARKEPLPV GRVKEDCRLL IVDSEGVPQE EGSQGEIVIL GASVSPGYYR
NEEMTDKAFF ARSWDGDVKR CYRTGDEGYL KEGLLHYGGR IDFQIKLNGY RIELEDIENN
LRKVEGVANA IVLPIKKDGR VHYLAGVVVP NKKLDKREFE IGQMIKAELK NYLPDYMIPR
KIMFRDSLPM TVNGKVNRAA LMEEFQ
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