Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0161 |
Symbol | |
ID | 7257110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 168140 |
End bp | 169105 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643560063 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_002456665 |
Protein GI | 219666230 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000141339 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTTAG GAAAATTTGA GCTGGGCATC CCTGCTTTTC TCGCCCCTAT GGCCGGTGTT ACGGACAAGG CCTTTCGGGA GACGGTCCGT TCCGTAGGGG GGCTCCATGT CTGGACCGAG ATGATCAGCG ATAAGGCATT GACCTATATG AACTCAAGAA CTTTGGAGAT GTTGGATCTT TCCGGGGAAG CTTCCCCGCG CATTGTTCAG CTCTTTGGCT CAGAGCCTGA AGTCATGGCC AAGGCAGCAG CTTTGGCTGT GGAGCGGGAT GCCGAGATCA TTGATATCAA TATGGGGTGT CCAACACCTA AAATTGTCAA AAACGGGGAA GGTTCGGCAT TGCTGCAGGA CCTTCCCTTA GCGCAGCGCA TTGCTGAAGC TGTTGTGAAG GCAGTGGAGG TTCCGGTGAC GGTCAAAATG CGCCTTGGCT GGACTGCAGA AAGGATCGTT GCTCCTGAGC TGGCCAAGCG GGTGGAAGCT GTAGGCGTCC AGATGGTCAG TGTCCATGGG CGGACCCGGG AGCAATTTTA CGCAGGTACT GCCAATCGGG ATGGGATAAA AAAGGTTAAA GGGGGGGTAA GCATCCCGGT AATAGCCAAT GGGGATATTT TTTCCCCTCA AGAAGCCAAA ACAGTTCTCG AAGCAACAGG CTGCGATGGA GTTATGGTAG GCCGGGGAAG CCTTGGCAAC CCCTGGCTGA TTCCACAAAT TAATGTTTTT TTGAATAAGG GCGTGCTGCT TGAGGAACCC TCTTTAGAGC AGAAGCTCAA AGTGGCCACA GAACATTTTG AGCGAGTGCT GAATTATAAA GGAGAACGCA TCGGCCTTAA CGAAATGCGT AAGCATGCCG TCTGGTATAT TAAAGGGATT CGCAATGCTG CGCAGATGCG GGATTATATT ATGCAGACAA AAACCCCCCT GGAAATGAAG AATCTATTCC GAAGGATTTT GCAGGAAAAT GCATAA
|
Protein sequence | MRLGKFELGI PAFLAPMAGV TDKAFRETVR SVGGLHVWTE MISDKALTYM NSRTLEMLDL SGEASPRIVQ LFGSEPEVMA KAAALAVERD AEIIDINMGC PTPKIVKNGE GSALLQDLPL AQRIAEAVVK AVEVPVTVKM RLGWTAERIV APELAKRVEA VGVQMVSVHG RTREQFYAGT ANRDGIKKVK GGVSIPVIAN GDIFSPQEAK TVLEATGCDG VMVGRGSLGN PWLIPQINVF LNKGVLLEEP SLEQKLKVAT EHFERVLNYK GERIGLNEMR KHAVWYIKGI RNAAQMRDYI MQTKTPLEMK NLFRRILQEN A
|
| |