| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0127 |
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| Symbol | |
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| ID | 7257076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 132342 |
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| End bp | 134741 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643560030 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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| Protein accession | YP_002456632 |
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| Protein GI | 219666197 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAC AACCAGAGTT GCAGAACAAA ACCAAAATCA GTCGGCGTGC CTTTGTGAAA
TGGAGCGCAG CCGCAACAGC TACTGCAGCG ATAGCCCCCT CTCTCGTGGG TTGCAGCACA
CAGACTCAGG CCAGTGGCGA GCCCGCAGTA GTGCAAGCCG GACAGCGTCT TGCCGGTGCC
GAGGAGAAAC CTTCGATCTG CTGGCATAAC TGCGGCGGCC GTTGTCAGCT TAAAGCCTAT
GTCAAGGATG GGGTGGTCGT GAGGTTTGGC ACGGATAATG TGGGACCTGA TACCCCGGAG
GACTTGCAGG CCCGGGCCTG TTTGAAAGGC AGAACCCAGC GGCAGCGACT TTATCATCCC
GACCGGCTTA AATACCCCAT GAAAAGGGTA GGAGAGCGGG GCAGCGGCGA ATGGGCCCGC
ATCAGCTGGG AAGAAGCTTT TGACACCACC GCCAAGGAGC TGCGCAGGAT TATTGATCAA
TATGGCAATG AATCGGTCTA TTTTAACTAT GCCTGCGGAG CTTACGGCTT ACTGAATCAA
ACCAACTCCA ATAACTCTCT GCGCCGGCTT CTTAATATCA TGGGGGGCTA TCTGCAAAGC
TATGGCAACT ACAGCCAGGC CAACTATATG TATGCAGTTC CCTATATGTT CGGTAATCCT
TATAGCGGCA GTTCCCCCAC CACTTTCCCT GATGCCAAAC TGATTGTTAT GTTCGGGGAT
AATCCTGCCT GTACCCGGGT AGGCGGCTTT AACTCCACTT ATTACCTGAA ATTAGCCAAA
CAAAACGGAG CACGCATTAT CGTTATTGAC CCCCGTCATA GTGACACAGT GAGCACCTTT
GCCGATCAGT GGATTCCCAT CCGGCCCACT ACGGACAGTG CCCTGGTTGC CGGTATGGCT
TATGTTATGA TCAGCGAAGG CCTGCATGAT CAAGCCTTCC TGGACAAATA TTGCCTTGGC
TTTGACGAAG AACACATGCC GGAAGGGATT CCCGCCGGTA ACTCCTACAA GAGCTACATC
CTTGGTGAAA GTGATGGCAA GCCGAAGACA CCCGAATGGG CTTCAGAGAT CACCGGGATT
CCCGTGGAAA CCATCAAACA GCTTGCCCGG GACATTGCCG GGACCAAGCC CGGTTTTATC
CTGCAAGGAC GGGGAATTCA GCGCCATGGC AACGGAGAAT TTCAGTCTTT GGCGGTTCCT
GTACTGTCAT TCATGACCGG CAATGTGGGA ATTTTGGGCA GCAATCCTGG CTTGTATGAA
GGCGGCCCTT CCGTAAAAAC GGGCAACTAT CCCATTGGAA CGAATCCGAT CAAGACAAAG
ATCTCCATCT TCATGTGGAC CGACGCCATT GAAAGAATTT TGACTAAAGA GCAGGACCGC
ATTGAAGGTG CGGACAAAAC AAAATCGACC ATCAAAATGA TCATCAATTA CGGCGGCAAT
ACCCTGATCA ATCAGCATTC CGATTCTGGA CGGACCGCTG CGCTGCTTAA AGATGACAGC
AAATGCGAGT TTATCCTGGG TATGGATAAT TTTATGACTC CCAGTATGCG GTATTGCGAT
ATTGTCCTGC CGGGTGTTAC CCAGTTTGAA GTCAATGACA TGATCACCCG TTCCATGGGC
CATGGGGTGG CTTATTACGG GCAAAAACTG GTCGAACCCA TGTTTGAGTG CAAGACCATC
AATGAAGTGG GCCGCGCTTT GGCGGAAAGA CTGGGTGTAT TGGCTCAGTT CGACGACGGC
AAGTCGGAAG AAGATTATCT GCGGGAATTT GTCGGGGTAT CCCAAGCCAG CCATCCTGAC
TTCCCCTCCT ATGAAGAATT CAGGGAAAAA GGAATTTATA AGACCAAAGC AACGAAAGTA
GTAGCCTACG AAAAGTTCAT TAAAGATCCG GAGGCCAATC CTCTGACCAC TCCTTCCGGG
AAATTTGAGA TTTTCTCCAA GGATCTCTAT GACATCCAAA ACCCGCAGAT TCCGGCCATT
CCTAAATATA TGCCTGCGGA AGAAGGTCCG GAAGATCCCC TGAAGGAAAA GTATCCCCTG
CAATGCATTG GTCACCATAC CAAACGCCGC GTACACTCCA CTTTCGATAA TATGCCCTGG
CTGGAAGAAG CGGAAGCTCA AATGCTGTGG CTGAATCCCC AGGACGCTGC GGCTCGGGGG
ATCAAAGACC ATGATCTGAT TAAAGTTTAC AATGACCGGG GTACTGTGAA GGTTAAAGTA
AAAGTGACTC CCCGTCTGAT TCCCGGAGTT TGCTCACTTC CTCAGGGAGC ATGGTACACT
CCTGACCAAA GCGGTGTTGA TGTAAGAGGA TGTATCAATA CTCTGACGAA ATGGACGCCT
AATCCCCTTT CCAAAGGCAA TCCCCAGCAT ACGAACTTAG TTCAAATTGA AAAAGCGTAG
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| Protein sequence | MSKQPELQNK TKISRRAFVK WSAAATATAA IAPSLVGCST QTQASGEPAV VQAGQRLAGA
EEKPSICWHN CGGRCQLKAY VKDGVVVRFG TDNVGPDTPE DLQARACLKG RTQRQRLYHP
DRLKYPMKRV GERGSGEWAR ISWEEAFDTT AKELRRIIDQ YGNESVYFNY ACGAYGLLNQ
TNSNNSLRRL LNIMGGYLQS YGNYSQANYM YAVPYMFGNP YSGSSPTTFP DAKLIVMFGD
NPACTRVGGF NSTYYLKLAK QNGARIIVID PRHSDTVSTF ADQWIPIRPT TDSALVAGMA
YVMISEGLHD QAFLDKYCLG FDEEHMPEGI PAGNSYKSYI LGESDGKPKT PEWASEITGI
PVETIKQLAR DIAGTKPGFI LQGRGIQRHG NGEFQSLAVP VLSFMTGNVG ILGSNPGLYE
GGPSVKTGNY PIGTNPIKTK ISIFMWTDAI ERILTKEQDR IEGADKTKST IKMIINYGGN
TLINQHSDSG RTAALLKDDS KCEFILGMDN FMTPSMRYCD IVLPGVTQFE VNDMITRSMG
HGVAYYGQKL VEPMFECKTI NEVGRALAER LGVLAQFDDG KSEEDYLREF VGVSQASHPD
FPSYEEFREK GIYKTKATKV VAYEKFIKDP EANPLTTPSG KFEIFSKDLY DIQNPQIPAI
PKYMPAEEGP EDPLKEKYPL QCIGHHTKRR VHSTFDNMPW LEEAEAQMLW LNPQDAAARG
IKDHDLIKVY NDRGTVKVKV KVTPRLIPGV CSLPQGAWYT PDQSGVDVRG CINTLTKWTP
NPLSKGNPQH TNLVQIEKA
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