| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0113 |
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| Symbol | |
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| ID | 7257062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 118028 |
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| End bp | 120787 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643560016 |
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| Product | ABC transporter related |
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| Protein accession | YP_002456618 |
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| Protein GI | 219666183 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.441754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGAAA TAGATTATGG GGAGTTTGTT AAGCAAGCGG GAGTGAGTAT TCCCCTGGAT
GGCCAGGAAC CATTGTTTCT TCAGGAAGAT GGCTCTGTTT GGTTGGTGGA GCAGGGGAAG
GTGGCCGTCT TTTTAGCAAC TATGGAGAAT CAGCTGCAGG CGGGGGCCAA AATCTTCTTA
TTTGAAGGCC GAACCGGCGA TTGGCTTTTC GGGATAACCC CCGGGGGATC TCCCCACAAG
AAAGGTCTGC TGGTCTCAGG ACTACCGGGT TCCCGTCTTC TGCGGCTTGA TATCAGACAA
CTGACAGAGC TGCTTAGGGA TAGAAGAGAA ACCGATGGCG GGGCACAGAG GGGGCCCCAA
GTGCCGGCCC ATGGAGAGAA GATCTACGGG GCTGTAGGCC AATGGCTTCA TACTTTGGCC
AGAATCAGCC GGCACGGGGA CATCTCCCAA GATGAAGTTG CTGCCACAGC CGAGGTGGTG
CTATCTGAAT ATGAGTATTT GACCAACGAT TCGCTTCGCG CAAGGTACCA TTCCCAAGTG
TTGCAAGGGG TGAGTGATCT TTGGGACAAA AAAATAGCGG CAGAGCAGAA AAGACTGGAA
GAGAAGGGCC GCTCCGATCA ACGGTTGATG GCCAACGCCA TGGCAAGGCT GGCTGCCATC
ACGGAAGAAG TGGAAACCAA GGTCTTGGCA GATCAGACGG GGGATCCCCT GCTGGATGCT
TGCCGCCTTG TGGGTCGGAC TATGCAGATC GGGATCGTCG CGCCCCCTGA AGTCTTGGGA
AGTTCAAAAG TGATGCTGCT GGATGAGATC GCCCGGGCTT CACGTATAAG GGTGAGGGAA
GTGTCCCTGC ACGGCAATTG GTACACCCAG GATAGCGGCC CTCTCCTGGG CTATATGAAA
GAAGATCATC GCCCGATTGC CCTAATCCCT GCTACGCCGG CAAGCTATTG TATCCATGAT
TATACCCTGG GGATCACCAG GTCTGTTGAC AGTGAAACAG CCCAGGAGAT TGATGCCTTT
GGTTTTGTCT TCTACCGCCC TTTAGCCGAG AGAAAAATCA CTGCCCGGGA TTTGCTGGCC
TTAGGCTGGG GAAACAGCTG GCGCAGGGAT TTCCTGATGA TTCTCCTCAT GGGTGTTTTG
GGTGGTATCT TAGGGACAGC CACACCTCTG GCCACTGGAA TTATCTTTAA TACTATTATT
CCCGAAGGGG AGAGGGGACA CTTAGTCCAA ATAGCCTTTT TTCTGGGAGC CAGCGCCTTA
GCCGCGATGA TCTTCCAGTT CGTGCGCAGC TTGGCTGCCT TGCGGATCGA GGGAAAAATG
GAGGGCGCTA TACAAGCAGC TATTTGGGAC CGCTTGTTGA GCCTGCCTGT ACCATTTTTT
AAGCAGTTTC CAGCCGGTGA ATTGGCGATG CGGGCGATGG GGATCAGTCA GATTCGCAAA
ATTCTCTCAG GTGTGACGTT AAATACGGTT CTCTCCAGCA TTTTTTCGGT TTTTACACTG
GTCTTAATGT TCTATTATGA TCGCCGGCTC GCCGCTGCAG CCACGATGTT AGTGGCTGTC
GAACTGCTGA TCATAGGATT TTTGGGTTAT CTGCAAGTGC ATTATGAACG AAAGATCTTA
GAAGTTTCGA ACCAAATCGC AGGGATGATG CTGCAGCTGA TCGGCAGTAT TACAAAGTTT
CGGGTAGCCG GTGCCGAGGT TAGAGTTTTT TACAGGTGGG CTGAGAGGTT CAGTGAACAA
CGTCAGTTCG TCTTTAAAAA GAGGATCCTC GGGAACTGGC TGACGACTTT TCATGATGTG
TTCCCCATCC TTGCCGGCAT GATCATTTTT TATACTTTGA TTGCCGGCCA TAGCTTATTA
TCACCAGGGG AGTTCATTGG CTTTAATGTA GCGTTTATCT CGTTTATGAT GTCCATGACT
TCTTTGACGG AGGCGCTTAT TGGTGCATAT AGTGTGATTC CCCTCTATCA ACGGGCGAAA
CCGATTCTGG ACACTCTACC GGAGTATGAT GAGACGAAAA TCGCACCTGC CCCCCTCAGA
GGCTCCATCG CAATGGATCA TATTTCTTTT CGCTATAAAG TGGATGGGCC TTTGGTTTTG
AAAGATGTAT CCTGCCGGAT TGAGGAGGGG GATTATGTCG CTTTAGTGGG CACTTCCGGT
TGTGGAAAAT CGACATTGTT AAGGATTTTG CTGGGCTTTG AAAAGCCGGA GACCGGAAAA
ATATATTACG ATGGTCAGGA TCTTGAGAAA GTGGATATAC GGGCGATCCG GAAGCAACTG
GGGGTTGTAC TGCAAAATGG TCAGCTCATG TCAGGGAATA TTTTCACGAA TATTGTGGGT
GCCAATCCTT ATCTCACGAT CGATGACGCC TGGGCAGCGG TCAAAATGGT CGGGATGGAA
GAGGATATCC AGGCCATGCC CATGGGAATG CATACCATGA TCAGCGAAGG CGCCTCGACC
CTCTCAGGTG GACAAAGACA ACGTTTGATG ATTGCCCGGG CCATAGTCAA TCAGCCGAAA
ATACTATTCT TTGATGAAGC TACCAGTGCC CTGGATAATC GAACACAAGC CATGGTCAGT
CAAAGCCTCG ACCGGCTGAA AGTCACCCGG ATCGTTATCG CTCACCGTTT GAGTACGATC
ATTAACTGCA GCAAGATCAT CGTTATGGAT CAGGGAAGAA TCGTCGAGAG CGGTACCTAT
GATGAACTGA TGAGCAAGGG CGGTATTTTC GCTAACCTCG TTCACCGGCA ATTGACCTGA
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| Protein sequence | MSEIDYGEFV KQAGVSIPLD GQEPLFLQED GSVWLVEQGK VAVFLATMEN QLQAGAKIFL
FEGRTGDWLF GITPGGSPHK KGLLVSGLPG SRLLRLDIRQ LTELLRDRRE TDGGAQRGPQ
VPAHGEKIYG AVGQWLHTLA RISRHGDISQ DEVAATAEVV LSEYEYLTND SLRARYHSQV
LQGVSDLWDK KIAAEQKRLE EKGRSDQRLM ANAMARLAAI TEEVETKVLA DQTGDPLLDA
CRLVGRTMQI GIVAPPEVLG SSKVMLLDEI ARASRIRVRE VSLHGNWYTQ DSGPLLGYMK
EDHRPIALIP ATPASYCIHD YTLGITRSVD SETAQEIDAF GFVFYRPLAE RKITARDLLA
LGWGNSWRRD FLMILLMGVL GGILGTATPL ATGIIFNTII PEGERGHLVQ IAFFLGASAL
AAMIFQFVRS LAALRIEGKM EGAIQAAIWD RLLSLPVPFF KQFPAGELAM RAMGISQIRK
ILSGVTLNTV LSSIFSVFTL VLMFYYDRRL AAAATMLVAV ELLIIGFLGY LQVHYERKIL
EVSNQIAGMM LQLIGSITKF RVAGAEVRVF YRWAERFSEQ RQFVFKKRIL GNWLTTFHDV
FPILAGMIIF YTLIAGHSLL SPGEFIGFNV AFISFMMSMT SLTEALIGAY SVIPLYQRAK
PILDTLPEYD ETKIAPAPLR GSIAMDHISF RYKVDGPLVL KDVSCRIEEG DYVALVGTSG
CGKSTLLRIL LGFEKPETGK IYYDGQDLEK VDIRAIRKQL GVVLQNGQLM SGNIFTNIVG
ANPYLTIDDA WAAVKMVGME EDIQAMPMGM HTMISEGAST LSGGQRQRLM IARAIVNQPK
ILFFDEATSA LDNRTQAMVS QSLDRLKVTR IVIAHRLSTI INCSKIIVMD QGRIVESGTY
DELMSKGGIF ANLVHRQLT
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