| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0105 |
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| Symbol | |
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| ID | 7257054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 107633 |
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| End bp | 110542 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643560008 |
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| Product | transcriptional regulator domain protein |
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| Protein accession | YP_002456610 |
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| Protein GI | 219666175 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGAACA TAAGGCCAAA AGCTACTGAG GCACTTCTTC AACGCCCCCG TTTGCTGGAT
AAGATTGCCC TCCCCGGCAC TCAGCTTACT TACATACATG CCGATGCGGG CTATGGTAAG
ACGACCCTTT TGCTGCAATA TGCCAAAGGG CGTGACGATG TCGTCTGGAT GGCCCTTGAT
GGTAAGGATC GGGAGCCGAT CTTCTTTTTG CAGCATTTGG AATCCTCCCT AAAAGAGAAG
CTGATACAGT TTGAATTTCA TGCCACAGAC TATATTCCTT TCGCGGGGAG CGATACTTTT
GCTGCGGTTG TTCTTTCTGC GTTGCTGAAG GCGATTGGCA GCAGCGTGCT GACCATTATT
TTCGATGATG TTCATGTTAT TACCCATCAT CAGTTGACAG ATCTGCTCAC AGAATGGGTA
AAGAGCAGTC CCCCTAATCT TACCTTGATT ATGGCCAGCC GCCATGAATT GTGGAGCAGC
CTTTTTCGCT TAAAGATAGC CGGTGAGGTT GTGGAGCTGA CTAAAAAGGA TCTGTGCTTC
AACCAGGAGG AAGCGGAAAG GCTATGGGGT TTTTTTGATG AGGCGGCCTA TTCCGCCACT
GAGGGATGGA CCTTAGCCAT CCAATCCTAC CGTTTGGCTG CAGAGGGGAA CAAAGAGTTC
TCTCTGGCCA GGCTTGATGC CGATCGTGAT GTCAGCCGTT ATCTATTTAA TGAGATATTC
ATGGGAATCA CAGAGGAAAC CCGGGATTTC CTGAAAGCTA CTTCCCGGCT TCCGGAGCTG
GAAGTTCAAG GGTGCAACTA TTTGCTGAAT ATCAAACATT CACAAAAGAT CCTCGAAGAA
CTGATGCATC GGAATCTCTT CATTTTGCGA ACTTCAACGA CCTCCTATCG CTACCACACC
TTATTCCGCA ATTTTTTACA ACAAAATGAT GAGGGCAGAG GATGGGAGAT CCTGCATAAA
GCTAAGGACA GCTGCTATGG GAGCGGAGAT TATGGGCGGG CTGCTGAATA CGCCCTTCTG
GTAGAAGATG AGAAAATAGT TCACGCCTGC CTCAGTGCTA TGGCCGGGGA ATTCTTCACT
AAGGGGAGCA GCAGAAACCT GAAAAGATAT TTCGATTTTC TCGAGGCTCG CCACGTTGAA
CTGACGCCAA GGGTTCAACT GGTCAAAGGA ATTTACCTTT CTGATGGCGG TGATTTTTAC
CAAGCAGAAA AATATTTGAA GGTTGTTATG CCCCAGTTAA AAAGTGATGA GCAGGATCTC
TATATACTGG CCATGACCCA TTTGGCAAGA GTGAAGCGCA ACCGGGCTTC CTTCCCTGAA
AGCACTGCCT GTTTGGATAG CCTGCTCCCT CTGCTGGAAG GCGCACCCAT GGCAGCTTGG
TATGGTGTGG TCATTGAAAA GATTCACAAC CTGACCCTCA CCTCCCAACT GACCGAAGCC
TTGGCTTTAA CGATAGCTAT GATGAATAAA TGCTTAGTGA ATGGCGATTT AAGAATTAAG
GGCTGGTTTG AGCGCTATCT CACGGTGGTT TATTTTTACA AAGGAGATTA TAAAAACTGC
TTGCAGGCTT ATGAAAAATC CCTGGCTATT CCACAGGAAG AGCAGGATCA GCTGATGCGC
CACGGTGTGG GGGTTTATGC GGCTAAGGCT TATCAGATTG CCGGGCAGGA AGACAAGGCT
CGCCCCTTGC TGGATGCGGA GCTTTACCGG ATGCGCCAAT TGGGGCTTCA TGAGGAATTC
AGCATCAATT ATCTGTTGTA TGCCGAAACC CTTAATACTG CAGAGCAATT AAAATATTAC
CTGGGAAAAG CCGCTGATTT TTCAGCCGCC GACCGCTATC TGAATATGGC AGAGGACTAT
GCTCTATTGA ACCGCAGCAC CCGGGAGCAC TGGCTATTTG TGAAGATATG GAAGGATTGT
GCGGAAATCT TTAAACAGCC GGAGAAAGCT GAGGAAATTA CGGCAGGGAT ACTGACGCTT
ATTCAAGATA CCACACCCTT TTTTCAGACT GTGGCCTATG GACGGATGGC GAATGCCCTG
CAGGTGCATC AAAAGAATAG GGAGCAATCT ATAGAATACT ACCGGAAATC CATCGCCATT
GGGGAGGAAA TCGGCTGCTA TGCTTACGCG ACCCTTGCGT ATGGCAAGCT GGCATCCATC
TATTTGGAAG AAGGTGACGA AGAGCAGGCC CGGAGCTATA CCCAGCGCTT TCTGGAACTT
TCCTGCCAAT ATGACCACCG CTACTATATT CGTTTTAAGC CGCTTTTTGC AGATGTCTTG
AAGCAAGCGG CCGAGGCAGG CATTATGCCT GACTATACCC GTGAGCTGCT CGACTATGGA
GGATATGCCA GTGTCAGGGT TTATATCAAC ACCCTGGGGA CCTTTTACAT AGCCCCTGCC
CATGAGCGGA AGAGCCCGAT TAAGATACGC ACCCAGAAAG CCCGTGAGCT TTTGGCTTAT
CTATTGGAGC ATCGTGAAGG AGTGAGTAAA GAACGCATTT TCGATGACTT GTGGTGGGAC
AGCGAGGCGA ATGTCACCAG TTTATTTCAT ACCCGCCGGG GTGAGATCAA GCGGGCTTTT
GAGAGTGCAG GGGCCGGTAA CCCGATCTTG TATGAGCGGG GTGTGTACCG TTTGGAGATG
GCTGAGATTA GTTGTGATCT CGATGCCCTC CGGCAGGCGG CGGCTGGCTT TGCGCGGCAG
CCAAGCTTTA TCAACGCCCA AAAGGTTGTG GAACACTACA CCGGCCGCTA TCTGGGTGAC
TTAGAGGCAC TATGGGCGGA AAGCACGAGG CTCCGTCTTG AGGAACTCTT TCTTAGTGCA
GCGGTGGTCC TTCAGGAGGG CTATGCCGAA TCAGGAGATA AGTCAAAGGC CAGGGAATTG
ACACGGCGGT GTGCGCAGAT GGGACATTAG
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| Protein sequence | MRNIRPKATE ALLQRPRLLD KIALPGTQLT YIHADAGYGK TTLLLQYAKG RDDVVWMALD
GKDREPIFFL QHLESSLKEK LIQFEFHATD YIPFAGSDTF AAVVLSALLK AIGSSVLTII
FDDVHVITHH QLTDLLTEWV KSSPPNLTLI MASRHELWSS LFRLKIAGEV VELTKKDLCF
NQEEAERLWG FFDEAAYSAT EGWTLAIQSY RLAAEGNKEF SLARLDADRD VSRYLFNEIF
MGITEETRDF LKATSRLPEL EVQGCNYLLN IKHSQKILEE LMHRNLFILR TSTTSYRYHT
LFRNFLQQND EGRGWEILHK AKDSCYGSGD YGRAAEYALL VEDEKIVHAC LSAMAGEFFT
KGSSRNLKRY FDFLEARHVE LTPRVQLVKG IYLSDGGDFY QAEKYLKVVM PQLKSDEQDL
YILAMTHLAR VKRNRASFPE STACLDSLLP LLEGAPMAAW YGVVIEKIHN LTLTSQLTEA
LALTIAMMNK CLVNGDLRIK GWFERYLTVV YFYKGDYKNC LQAYEKSLAI PQEEQDQLMR
HGVGVYAAKA YQIAGQEDKA RPLLDAELYR MRQLGLHEEF SINYLLYAET LNTAEQLKYY
LGKAADFSAA DRYLNMAEDY ALLNRSTREH WLFVKIWKDC AEIFKQPEKA EEITAGILTL
IQDTTPFFQT VAYGRMANAL QVHQKNREQS IEYYRKSIAI GEEIGCYAYA TLAYGKLASI
YLEEGDEEQA RSYTQRFLEL SCQYDHRYYI RFKPLFADVL KQAAEAGIMP DYTRELLDYG
GYASVRVYIN TLGTFYIAPA HERKSPIKIR TQKARELLAY LLEHREGVSK ERIFDDLWWD
SEANVTSLFH TRRGEIKRAF ESAGAGNPIL YERGVYRLEM AEISCDLDAL RQAAAGFARQ
PSFINAQKVV EHYTGRYLGD LEALWAESTR LRLEELFLSA AVVLQEGYAE SGDKSKAREL
TRRCAQMGH
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