Gene Dhaf_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0071 
Symbol 
ID7257020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp71668 
End bp72384 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content50% 
IMG OID643559974 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_002456576 
Protein GI219666141 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID[TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000157753 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAAGAC CCATAGTAAT TCCTGGCAGA CAGACTCAGG GAATGGCGAT CATAATCGTC 
CTGACCGTGA TGTTTGGATT AGTTCTTTCC GTATTCTATC AAGGTTCGGC GGCAGTTCTG
GGACCTCTCG AAACAAAGTA TAAGGTTGTG GTCGATGCAG GTCATGGCGG TTATGATCCG
GGGGCGATCA CGAAGCAGGG CGTTTATGAA AAAGAAATCA ATCTGGAAAT GGCCAAGCGG
GTGAAGGAGC TGCTGGAGCC TGCCGGTATC GAGGTTATTC TGACCCGGGA AGAGGATATT
GATTATGTCC CGGAAGGGGT TCGGGGCAGG CAGTCCAAGA AGCAGGCCGA TCTTAACCAT
CGAATCTCCT TAGCTGCCGA AGCGGAGGCC GATACTCTGA TCAGCTTGCA TCTGAATGCA
ACACCCTCGG GACGAAATAC CGGTGCCGAA ACCTTCTATT ATTTTGATTC CGAAGAGGGG
AAACGATTAG CAGAAACGAT TCAGCAGGAG CTTATCAAAG TTCCGGGAAT GAATCGCAGG
ATTGCCAAGC CGGGGGATTT TTATCTTATC AAAAATGCTC CTATGCCTGC GGTCATTGTC
GAGCTGGGCT ATATCAGCAA TCCCAAAGAA TTTGCCAGGC TGCGGCAGTC CTGGTATCAG
GATCAGTTGG CTCAGGCTGT GGCTAAAGGT GTAGCCAATT ATTTCGGTTT GCCTTAA
 
Protein sequence
MRRPIVIPGR QTQGMAIIIV LTVMFGLVLS VFYQGSAAVL GPLETKYKVV VDAGHGGYDP 
GAITKQGVYE KEINLEMAKR VKELLEPAGI EVILTREEDI DYVPEGVRGR QSKKQADLNH
RISLAAEAEA DTLISLHLNA TPSGRNTGAE TFYYFDSEEG KRLAETIQQE LIKVPGMNRR
IAKPGDFYLI KNAPMPAVIV ELGYISNPKE FARLRQSWYQ DQLAQAVAKG VANYFGLP