Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0071 |
Symbol | |
ID | 7257020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 71668 |
End bp | 72384 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643559974 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_002456576 |
Protein GI | 219666141 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000157753 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGAAGAC CCATAGTAAT TCCTGGCAGA CAGACTCAGG GAATGGCGAT CATAATCGTC CTGACCGTGA TGTTTGGATT AGTTCTTTCC GTATTCTATC AAGGTTCGGC GGCAGTTCTG GGACCTCTCG AAACAAAGTA TAAGGTTGTG GTCGATGCAG GTCATGGCGG TTATGATCCG GGGGCGATCA CGAAGCAGGG CGTTTATGAA AAAGAAATCA ATCTGGAAAT GGCCAAGCGG GTGAAGGAGC TGCTGGAGCC TGCCGGTATC GAGGTTATTC TGACCCGGGA AGAGGATATT GATTATGTCC CGGAAGGGGT TCGGGGCAGG CAGTCCAAGA AGCAGGCCGA TCTTAACCAT CGAATCTCCT TAGCTGCCGA AGCGGAGGCC GATACTCTGA TCAGCTTGCA TCTGAATGCA ACACCCTCGG GACGAAATAC CGGTGCCGAA ACCTTCTATT ATTTTGATTC CGAAGAGGGG AAACGATTAG CAGAAACGAT TCAGCAGGAG CTTATCAAAG TTCCGGGAAT GAATCGCAGG ATTGCCAAGC CGGGGGATTT TTATCTTATC AAAAATGCTC CTATGCCTGC GGTCATTGTC GAGCTGGGCT ATATCAGCAA TCCCAAAGAA TTTGCCAGGC TGCGGCAGTC CTGGTATCAG GATCAGTTGG CTCAGGCTGT GGCTAAAGGT GTAGCCAATT ATTTCGGTTT GCCTTAA
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Protein sequence | MRRPIVIPGR QTQGMAIIIV LTVMFGLVLS VFYQGSAAVL GPLETKYKVV VDAGHGGYDP GAITKQGVYE KEINLEMAKR VKELLEPAGI EVILTREEDI DYVPEGVRGR QSKKQADLNH RISLAAEAEA DTLISLHLNA TPSGRNTGAE TFYYFDSEEG KRLAETIQQE LIKVPGMNRR IAKPGDFYLI KNAPMPAVIV ELGYISNPKE FARLRQSWYQ DQLAQAVAKG VANYFGLP
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