Gene Dhaf_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0062 
Symbol 
ID7257011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp63067 
End bp63915 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content50% 
IMG OID643559965 
ProductPSP1 domain protein 
Protein accessionYP_002456567 
Protein GI219666132 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0293146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAGG TCGTGGGGGT TCGTTTTAAG CGGGCCGGTA AAATATATTA TTTTTCTACA 
GGGGATCTTG CCCTGAATGC CAATGATAAA GTGATCGTGG AAACCGCCCG GGGAGTCGAG
TATGGAGAGT GCGTTCTGGC ACCCCGTCAG GTACCTGAAG CAGATGTGGT CATGCCTTTA
AAACCGGTGA TCCGCAAGGC TACTCCTGAG GATGAGCGGA TTGTTGAGGT CAATCGCACC
AAGGAGAAGG AAGCTTTTGA CATCTGCCTG AAGAAAATAG GAGATCATCA GCTGCCGATG
AAGCTGGTGG ATGTGGAATA TACTTTTGAT GGGAACAAAA TTATTTTTTC CTTTACGGCA
GAAGGTCGGG TGGATTTCCG GGAGCTGGTT AAAGATCTGG CCTCGATCTT TCGGACCCGC
ATTGAACTTC GCCAGATTGG GGTTCGGGAT GAAGCCAAAA TGCTGGGCGG GATCGGTTCC
TGTGGCAGAG TGCTGTGCTG CTCCAGCTTT TTAGGAGATT TTGAACCTGT ATCCATTCGC
ATGGCCAAGG ATCAGAAGCT CTCTCTTAAT CCAACGAAAA TATCAGGGAT TTGCGGTCGC
CTTATGTGCT GCCTGAAATA TGAGAATGGG GCTTATGATG AGTCTCACTG CAAAGGTCAG
TGCGGAAAAC AATGCCATCA GCGGGAAGAA GATATCCTGG TTCTCAGCGA GGAATCGGTA
CTCAAGGCTT TGGAAGAGCA AGAGCTTAAG GGAGAACGGG GTTCTGCCGT ACCGACCGCC
GGGAAGGGGC GTCAAGAGGG ACGCCATAAG AAAGGAGAAA AGAACAGAGG GAAGAGTGAG
AAGGTATGA
 
Protein sequence
MVEVVGVRFK RAGKIYYFST GDLALNANDK VIVETARGVE YGECVLAPRQ VPEADVVMPL 
KPVIRKATPE DERIVEVNRT KEKEAFDICL KKIGDHQLPM KLVDVEYTFD GNKIIFSFTA
EGRVDFRELV KDLASIFRTR IELRQIGVRD EAKMLGGIGS CGRVLCCSSF LGDFEPVSIR
MAKDQKLSLN PTKISGICGR LMCCLKYENG AYDESHCKGQ CGKQCHQREE DILVLSEESV
LKALEEQELK GERGSAVPTA GKGRQEGRHK KGEKNRGKSE KV