Gene Dhaf_0052 details

Gene Information

• Locus tag: Dhaf_0052
• Symbol: recR
• ID: 7257001
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 49703
• End bp: 50299
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 643559955
• Product: recombination protein RecR
• Protein accession: YP_002456557
• Protein GI: 219666122
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000011836
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTT TGAATTATCC TGAACCCCTG GCCGATTTGA TTACAGGTTT ATCCCGCTTG 
CCTGGGATCG GACCGAAAAC GGCGGGTCGT TTGGCTTTTT ACCTGCTGCA GCAACCCCAG 
GTGGCCGAAA ACCTAGCGGA AGCCATGATC AGAGCTCAGC GGGAAATCAG GCAGTGTTCC 
CTATGCTGTA ATTATACGGA TCATGATCCC TGCCCCATCT GTACCGGGGA GAAAAGGGAG 
CGTACCCTGC TCTGCATTGT GGAGCAGCCC CGGGATGTGG TTTCTTTAGA GAAAACAAGA 
GAATTTAAAG GGCTTTATCA TGTCCTGCAT GGCGTCATAT CTCCTTTGGA AGGAGTCGGG 
CCGGAGCAGC TGACGATTTC CAAGCTTTTA GGGCGTTTAG AAGGAGTCCA GGAAGTCGTC 
ATGGCTATGA ACCCCACGGT AGAGGGAGAA GCTACGGCAC TGTATTTATC CAGGCTGCTT 
AAGCCTTTGG GAATCAAGGT AACACGGATT GCCCATGGTT TACCGGTGGG CGGTGATCTG 
GAGTATGCCG ATGAAATTAC CATCGCCCGT GCTTTAGAAG GCCGTCGCCA GATCTAA 

 

Protein sequence

MDFLNYPEPL ADLITGLSRL PGIGPKTAGR LAFYLLQQPQ VAENLAEAMI RAQREIRQCS 
LCCNYTDHDP CPICTGEKRE RTLLCIVEQP RDVVSLEKTR EFKGLYHVLH GVISPLEGVG 
PEQLTISKLL GRLEGVQEVV MAMNPTVEGE ATALYLSRLL KPLGIKVTRI AHGLPVGGDL 
EYADEITIAR ALEGRRQI