Gene Dhaf_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0040 
Symbol 
ID7256987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp37970 
End bp39280 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content43% 
IMG OID643559942 
Producthistidine kinase 
Protein accessionYP_002456545 
Protein GI219666110 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00046406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAGAG CAAAACGTGA ATATAAGCTG TCCCAAACCT TGATGATCAC AGCTGTTTTG 
GCATGCCTTG CTTCCGCTTT GCTTTTTCTC GGTCTGCAAT ACCTATCCCG CGGCATCATC
TATGATTATT GTAAAAAGCC GGAAGTAATT TCTGCTCACA TCGAGAAAAA AATAACCAGC
CTGCGGCAGT ATATTAAAGA CAATCAGATC TCTTTGTCGG ACCTGTCCGA ATTGGATAAC
TGGATGCGGG GCAAGGAATT AACGGAGATT GTGATTTATC ACGACAATAC GTTGATCTAT
AGTTCACATA CCCTGTCACC GAGCTTTTCC TTTCCCAGCC AACCCAAATT TCCCGACTTT
TATCTATGGC ATAATAAATA TATATTGACT TTCCAGGAGG GAACCGCTGA AGTTTTTATC
AAGGATTTTT TTGAACACCG TTATATAGAC TATATTACTT ATTTTAATTT GCTGGTGTTC
TTCCTCTGTT TTATTACCAT CATGGTCTTT TTCATCCATA AAAAGGTATC CTATATCAAT
ACCTTGGAAA AGGAAATAAG GATTTTAGAA GGGGGCGATC TCCATTACTC AATTACCATC
AAGGGCAACG ATGAACTGGC CTCTCTGGCC CAGGAAATTG ATGAAATGCG CAAAGCCTTC
ATCGCCCGGG AAGACTACGC TGAACGGGTC AGAGCGGCCA CCAATACCTT GATGGCCGGT
GTCTCCCATG ATCTCCGCAC CCCTCTTACG GCATTAATCG GCTATCTGGA GGTGCTGGAA
GGTGAAGATA TCCCGGCCAA GGAGAGCTCT TTCCTTGGCA AGTGCAAAAA TCGGGCCCTG
CAAATCAAAG ACTTGATTAA CCATCTGTTT GACTACTTTT TTATATCCAC CAACGATTAT
AAGGAGATTG ACTTAAAGCA TTACCCTGCT CAAGAAGTGC TGAGAGAGAT GATCCATGAG
CATATCTATT TAATGGAACA AAGTGGCTTT ATGGTTTCCT CTACTGTTGA GCTGCCTGAG
GGGACGATCA AGGTGGACTC AGGCATGATT CAGAGAATAT TTGACAATAT GCTCTCCAAT
GTGCAAAGGC ATGCTGATCC TGCTCATCCG GTCCGGCTGT ATAGCACCAT TGACTCCGGC
GAGTTGGTTT TAGTTTTTGA AAATCATAGT CAGCATTCTC TGGACCCTAC TCCTAAAACA
GGCTTGGGGT TAAATAATTG CCAAAAAATT ATGCTTCTGC ATCAGGGGCG GTTTATGTAT
AGGCAAAACG ATCATGTATT TACAGTTCAG CTTGCTTTCC CGCTTATCTA A
 
Protein sequence
MNRAKREYKL SQTLMITAVL ACLASALLFL GLQYLSRGII YDYCKKPEVI SAHIEKKITS 
LRQYIKDNQI SLSDLSELDN WMRGKELTEI VIYHDNTLIY SSHTLSPSFS FPSQPKFPDF
YLWHNKYILT FQEGTAEVFI KDFFEHRYID YITYFNLLVF FLCFITIMVF FIHKKVSYIN
TLEKEIRILE GGDLHYSITI KGNDELASLA QEIDEMRKAF IAREDYAERV RAATNTLMAG
VSHDLRTPLT ALIGYLEVLE GEDIPAKESS FLGKCKNRAL QIKDLINHLF DYFFISTNDY
KEIDLKHYPA QEVLREMIHE HIYLMEQSGF MVSSTVELPE GTIKVDSGMI QRIFDNMLSN
VQRHADPAHP VRLYSTIDSG ELVLVFENHS QHSLDPTPKT GLGLNNCQKI MLLHQGRFMY
RQNDHVFTVQ LAFPLI