Gene Dhaf_0039 details

Gene Information

• Locus tag: Dhaf_0039
• ID: 7256986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 37311
• End bp: 37919
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643559941
• Product: ABC transporter related
• Protein accession: YP_002456544
• Protein GI: 219666109
• COG category: [E] Amino acid transport and metabolism; [P] Inorganic ion transport and metabolism
• COG ID: [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.118925
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTGC TGGGAGAGAA CCTGGGGGTT TATTATAAAA AGGATCAGTG GATTTTTAAG 
AACATGAACA TCAAGGTGTT ACCCGGCCAA GTTCTTGGTT TATCCGGATA CAGCGGCTGC 
GGTAAAACGA CCCTGGCCAG AGTTTTAGCC GGATATATCC TTCCTCAGAC CGGCAGGGTA 
AGCGTGGATT CTAAGCCTTT GGCGCCAAAA AGCTTTCGCC CGGTCCAATT AATTTATCAG 
CACCCGGAAA AGGCCATCAA TCCCCGCTGG AAAATGGAGG ATGTCTTAAC CGAAACCTAT 
ACCCCTTCCC AGGATATCCT GGATGCTTTC GGCATCCGGG AGGATTGGCG GAAGCGCTGG 
CCCATCGAGC TCTCCGGCGG AGAGCTGCAG CGGTTTTGTA TCGTGCGTGC TTTGAACCCA 
CAGACCCGGT ATATTATTGC CGATGAAATG ACCACCATGC TGGACGCTAT TACCCAGGCC 
AGAATTTGGC ATAGTTTTCT CCATATTTGC CAAAGCAGAA AGATTGGTGT AATTGTGGTC 
AGCCATGAGC TCAGTCTTCT GAACCGCCTG TGTGACAAGG TCATTCAAGT GGGGAATACG 
TGGGAGTAA 

 

Protein sequence

MALLGENLGV YYKKDQWIFK NMNIKVLPGQ VLGLSGYSGC GKTTLARVLA GYILPQTGRV 
SVDSKPLAPK SFRPVQLIYQ HPEKAINPRW KMEDVLTETY TPSQDILDAF GIREDWRKRW 
PIELSGGELQ RFCIVRALNP QTRYIIADEM TTMLDAITQA RIWHSFLHIC QSRKIGVIVV 
SHELSLLNRL CDKVIQVGNT WE