Gene Dhaf_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0036 
Symbol 
ID7256983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp34646 
End bp35623 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content48% 
IMG OID643559938 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002456541 
Protein GI219666106 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0122528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAA AAATCCTCAG GCGCTTTCTG CGCATGATTA CCCTGATGCT GGGCTTATCC 
ATCCTGACCT TCTGGTTAAT CCATTTGTCT CCGATTGATC CTGTCAATGC CTATGCGATC
AGTGATACCT CTATGTCACA GGAACAGCTG GAAAAGCTGA AGGAATACTG GGGGGTTAAC
AAATCCCCTG TGGAACAATA TTTTTCCTGG GCAGGGGCCT TGCTGCAGGG TGATTTTGGT
ATGTCCAAGC TGTATAGAGT CCCCGTTATG GACATTATTA AAAGCAGAGC CATGACATCT
TTTGCGCTCA TGGGAACAGC ATGGCTCTTG TCCGGTGTTT TCGGCTATCT GCTGGGAGCG
GTGGCCGCCA TGAGAAGAGG GAAGCTGCTG GATCGCTTTA TTAAATGGTA CAGTTATATT
CTGGTTTCCA TACCCACCTT TTTGCTGGCT TTAATTTTAC TGCTTGTTTT TGCAGTCTGG
CTGGGAATGT TTCCGATCGG CCTGACTAAA CCCATAGGAC TGGCGGATGC CGATGTTACT
TTGGCGGACC GCCTCCGCCA TTTCATTCTT CCCGCCTTGA CGTTAAGCCT TTTAGGGGTT
GCCAATATCG CCATGCACAC CCGGGAAAAA ATGATCGATA TCCTCAATAC GGAATATGTG
ACCTTTGCCA GAGCACGAGG AGAAACAGCC TGGCAGATTT TCAAAAACCA TGGTTTCCGC
AACTCCATTA TTCCGGCTAT TTCCATTCAG TTTGCCTATT TCAGTGAATT GTTCGGCGGT
TCCGTTCTGG CGGAGCAGGT ATTTGCCTAT CCGGGGCTGG GCAGCACTCT GACCACCGCC
GGCTTAAAAG GAGATCTTCC CCTGCTGCTG GGAATTATTT TAATCGCTTC CTTGTTTGTC
TTTATTGGCA ATTTTATTGC GGACATCTTA AATACCATTG TCGATCCGCG CATTAAAAGG
GGGGAGCTAA GATGCTAG
 
Protein sequence
MSQKILRRFL RMITLMLGLS ILTFWLIHLS PIDPVNAYAI SDTSMSQEQL EKLKEYWGVN 
KSPVEQYFSW AGALLQGDFG MSKLYRVPVM DIIKSRAMTS FALMGTAWLL SGVFGYLLGA
VAAMRRGKLL DRFIKWYSYI LVSIPTFLLA LILLLVFAVW LGMFPIGLTK PIGLADADVT
LADRLRHFIL PALTLSLLGV ANIAMHTREK MIDILNTEYV TFARARGETA WQIFKNHGFR
NSIIPAISIQ FAYFSELFGG SVLAEQVFAY PGLGSTLTTA GLKGDLPLLL GIILIASLFV
FIGNFIADIL NTIVDPRIKR GELRC