Gene Dhaf_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0018 
Symbol 
ID7256965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp17386 
End bp18852 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content47% 
IMG OID643559920 
ProductABC transporter related 
Protein accessionYP_002456523 
Protein GI219666088 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGT TATTAAAAGC AACTGATATT TATGTGGAAT ATAAAGGCCG CGAAATATTG 
AGCATCAATG AATTGGAATT ATATAATTAC GACCGTATTG GATTGGTGGG CAGCAACGGA
GCAGGAAAAA GCACTCTCCT CAAAGTGCTG CTTGGAGAAT TAGCTTTGCC GGGATGCATA
GTGAACGGAA TAGGTAACTT TGCTTATATA CCCCAATTGA CAGAAGCCGC CTGGCAGGAA
TCTATAGACC ATGCCCTGCT GGGCAAACTT GGTGTCAGCG GGCTGGATAC ACAAACCATG
AGCGGCGGTG AAGAAACCCG CCTGAAAGTT GCCCAGGCAC TCTCCGGCCA AGTGCATGGC
ATTTTTGCCG ATGAGCCTAC CTCCCACCTC GACCGGGAGG GAATTGATTT TTTGATTGGC
CAGCTCCAGT ATTTCTCAGG CGCACTCCTG ATCATCAGTC ATGACCGCTA CTTTCTCGAT
AAGGTTGTAA ACAAAATTTG GGAGTTGAAG GACGGCAAAA TCACTGAGTA TTGGGGGAAC
TATTCCGACT ATCTGGGCCA GAAGGAGGAA GAACGCCAAC GCCAAACAGC CCAGTATGAA
CAGCATGTTA TGGAACGGGC GCGCCTGGAG CGGGCTGCGG AAGAAAAACG GAAACAGGCG
CAGAAAGTTG ATCAAAAAAC GAAAGGAGCC GCTAAAAGGG GGGCCACTGA AAGCGGAGGC
CGTCTCGGGC ATCAAAAGAC GATAGGAAGC AAGCAAAAAA CTCTCTACAA GGCGGCAAAG
TCCATGGAAC ACCGTATTGA GTCCATGGGG GATATATCGG CTCCCGAGAA AGCCCGCACC
GTTCGTTTCC GGCAAAGTCA GGCGCTGGCT CTGCACAATC CTTATCCGAT TACAGGGACA
GAGATCAACA AGATTTTTGA CAACAAGGTG CTGTTTGAAA AAGCATCCTT TCAAATTCCT
CTTGGCGCCA AAGTAGCCTT CACCGGGGGC AATGGAACAG GAAAAACAAC CCTTTTTCAA
ATGATTTTGC ATAGAGAAGC CGGTATAGCC ATTTCTCCAA AAGCAGAAAT CGGTTATTTT
GCTCAAAACA GCTATAAATT CAATCGCGAC CAAGGCGTCA TGACCTTTAT GGAAGACCAT
TGCGACTATG GGCAGTCGGA AATCCGCTCT GTACTGGCCT CTATGGGGTT TTCACCAAAT
GATATCAAAA AAAATCTGTC AGTGTTAAGC GGGGGAGAGC TCATCAAATT ATTGCTGGCT
AAAATGCTGC TGGGGCGCTA CAATATTCTA CTGATGGATG AGCCCAGCAA TTTTCTGGAT
TTGCCCGGCA TAGAGGCTTT GGAAATATTA ATGAAAAGCT ATGCAGGAAC AATTCTGTTC
ATTTCCCATG ATCAAAGACT ATTGGAAAAT GTGGCGGACA GAATCTATGC CATTAAAGAT
AAGCGACTTT GTTTAATCAA AGAATAG
 
Protein sequence
MELLLKATDI YVEYKGREIL SINELELYNY DRIGLVGSNG AGKSTLLKVL LGELALPGCI 
VNGIGNFAYI PQLTEAAWQE SIDHALLGKL GVSGLDTQTM SGGEETRLKV AQALSGQVHG
IFADEPTSHL DREGIDFLIG QLQYFSGALL IISHDRYFLD KVVNKIWELK DGKITEYWGN
YSDYLGQKEE ERQRQTAQYE QHVMERARLE RAAEEKRKQA QKVDQKTKGA AKRGATESGG
RLGHQKTIGS KQKTLYKAAK SMEHRIESMG DISAPEKART VRFRQSQALA LHNPYPITGT
EINKIFDNKV LFEKASFQIP LGAKVAFTGG NGTGKTTLFQ MILHREAGIA ISPKAEIGYF
AQNSYKFNRD QGVMTFMEDH CDYGQSEIRS VLASMGFSPN DIKKNLSVLS GGELIKLLLA
KMLLGRYNIL LMDEPSNFLD LPGIEALEIL MKSYAGTILF ISHDQRLLEN VADRIYAIKD
KRLCLIKE