Gene Dhaf_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0003 
Symbol 
ID7256947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2816 
End bp3913 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content44% 
IMG OID643559903 
ProductDNA replication and repair protein RecF 
Protein accessionYP_002456509 
Protein GI219666074 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.390569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAA AATGGCTGCA TTTAAAGTCT TTTCGAAATT ATCAGGATCA GGAAGTGGAT 
TTTCGGCCAG GTTTAACCAT CCTGCAAGGA GAAAATGGAC AAGGAAAGAC CAATATCCTG 
GAAGGTATTT ATTATCTTTT AACTGGAAAG TCTTACCGTG TCCATCGGGA GCAGGAACTG 
GCCCGCTGGG GAGAGAATGA ATTCCACCTC TACGGCGATT TCATCGTGCA GCGGCGCAAA 
CTGCGTTTAG AAAGCCATTA TCAGGACAAA AGAAAAATTA TTAAGATCAA TCAAATTCCT 
TGTCGAAAAT TATCAGAATA TGTCGGGACC ATTAATGTGG TTTTTTTTTC ACCGGACGAT 
CTGGTGATGG TCAAAGGCGG GCCGGCTGAG CGGAGACGCT TTTTAGATTT ACATATTGCT 
CAGCACCACT CCAAGCATAT TCAGCTCCTT AATGCCTATA ACAAGGTGCT TCAGCAAAAA 
AATGCCCTCC TGAAACAGGG ACAGGGAGGG AGCAAAAGTC AGATTGCTCA GATTGAACTG 
TGGAATGAAC AAATCCTCCG GATTGGCTCG GAAATTATCA GGAATCGTTG GGAATTTACC 
GGTCTGCTTT CCCGAAAAGG CCAGGAAATC TATGGGCAGA TTTCTTCGGG GAAAGAAGAG 
CTGACCATGG ACTATCATGC CCTGGGAAAA AATAATCTGG AGGAAGCTTT GGCCGCATTT 
CCCAAGCTCC TGGCAGAAAA GATGTCTTTG GAAATGGAAA GAAAGATGGT TTTGATCGGA 
CCTCATCGGG ACGACATTCT TTTTAAGCTC AATGAGCGTT CGGCCCGCCT TTATGGCTCT 
CAAGGGCAGC AGCGTTCGAT TGTTTTAAGC ACCAAATTAG CGGAACTGGA AGTGATCCGC 
CAGGAAAAAG GCGACTATCC CTTGCTTTTA CTGGATGATG TATTGTCTGA ATTGGATCGA 
TTCAGGAGAG ACTATCTATT AGACTATACA AAATCCTTGC AGCAAACCAT TATGACCATG 
ACCAGTGCGG AAACCCTGAC GCAAAGGGCA TCCTTATTGC TCAAAGTAGA AAAAGGGCAG 
ATTGGGAGGA TTGAATAA
 
Protein sequence
MEIKWLHLKS FRNYQDQEVD FRPGLTILQG ENGQGKTNIL EGIYYLLTGK SYRVHREQEL 
ARWGENEFHL YGDFIVQRRK LRLESHYQDK RKIIKINQIP CRKLSEYVGT INVVFFSPDD 
LVMVKGGPAE RRRFLDLHIA QHHSKHIQLL NAYNKVLQQK NALLKQGQGG SKSQIAQIEL 
WNEQILRIGS EIIRNRWEFT GLLSRKGQEI YGQISSGKEE LTMDYHALGK NNLEEALAAF 
PKLLAEKMSL EMERKMVLIG PHRDDILFKL NERSARLYGS QGQQRSIVLS TKLAELEVIR 
QEKGDYPLLL LDDVLSELDR FRRDYLLDYT KSLQQTIMTM TSAETLTQRA SLLLKVEKGQ 
IGRIE