| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_5441 |
|---|
| Symbol | |
|---|
| ID | 7190485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | + |
|---|
| Start bp | 5138493 |
|---|
| End bp | 5140700 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643558851 |
|---|
| Product | sensory box/GGDEF family protein |
|---|
| Protein accession | YP_002454361 |
|---|
| Protein GI | 218906527 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 152 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACAA CAGATACTTG GGTTTTAATT GGATATTTTA TTGCACAATC ATTAGTAATT
TACGCCGTAA TTAGTCTATA TAGAAGAGAA GAATATTCTT CTAGCAGAAT TTCATTAATT
ATCGGCTTTA CTATTATACT CGTGTACGGA TATATACACC TGTTTCAATT AAACGCAGGG
ATAAAACCTT CTTCTGAAGT CTCTTACTTA ATACATACTG CTTCAATTTT ATTAATCGGT
TTGTCGTCCA TACTATATAT TTTAGATAAA CCAATACAGC ACGAAACGAA AACAAAGTAT
TATCGATTTG ATTATGTGCG CTTCATATTA CCCTATTTTA GTATAATCAT TACTTTTTCT
TTTATTATCT TTCAACCTTG GGATGATAAG TTCATGTTAA TCGGTCTAGT ATTATCACTC
ATCTTATTAT TCTTACGACA ACTTTATATG TGGAAAGATA ATCAGGCACT AATCGATACA
TACGAACAGC TGACTACACA ACTAGAAGGC AAAGTAGAAG AAGGGGCATC TGCGTTATCA
AAGAGTGAAC AACGTTATAA ATCTTTATTC GAAGATCACC CGGATGCTGT TTTCTCTTTA
AATATGTATG GTATTTTCCA ACAATCTAAT ACAGCTTGTG AAAGCTTATT TACTGCCTAC
TATTGTGAAG TAGAAAGCTA TTCTCTTTTA CACTTTATTG ACCCAAAAGA CCATGATTTA
CTACAGAAAG CTTTACAACT AACGAAAGAA GGTAGCCCAC AAACTTTAGA AGTTCGTACA
AAAGAAAAAG AAGGTTATTA CTATTACCTT CACATTACAC TCATCCCTAC TTTCATAAAC
AAAGAAGTTG TCGGGATGTT CGGTATAGCA CGTGATATTA CAACTTTATA TGAAAAACAA
AAACAAGTAG AACATTTAGC CTTTCATGAT GCACTTACCG GATTACCAAA TCGCCGCAAG
TTTGAAAAAG ATTTAAAAAA TATTTTAAAT ACAGCTCAGG CTAGCGCAAA TGATGTTGCC
GTCATGTTCC TTGATTTAGA TCGATTCAAA AAAATTAACG ATAGACTCGG TCATGGCATC
GGAGACTTAT TATTAATTGA AGTCGCAAAA AGGTTACGTG GTTGCTTACG TTCAAAGGAT
GTCGTTGCTC GTCAAGGCGG AGATGAGTTT ACAATTCTAT TACCAGATAT GTACTCAGAA
AAAAGTGCGG CTTTTATAGC TGAACAGATT TTAAATATTT TAAACAAACC ATTCTTCATT
AAAGATGAAG AACTGTCTAT TACACCAAGT ATCGGAATTG CGATGTACCC TGATTGTGGA
ACTGATGTAA CAGAATTAAT GAAAAATGCT GATATGGCTA TGTATCGCGC GAAAGCAAAT
GGAAAAAACC GATTTGTTTT CTTCTCAAAA GAAATGAGTA TCGCTCAAAA TGAGAGTAAC
TTCTTAGAAG GAGAACTTTC AAAAGCATTA CAACAAAATG AATTTTTCCT TGAATACCAG
CCGCAAGTAA GCACAAAAAC AAAACAAATT ATCGGTTTTG AAGCATTAAT TCGTTGGAAG
CATCCAAAAC TCGGCATCGT ATCTCCTGCC CAATTCATTC CTCTAGCAGA GGAAACTGGA
TTTATTATTG AACTTGGAAA TTGGATTTTA CGTACTGCTT GCTTAGAAGC AAAAAGATGG
CATAATCAAG GTTTCTCTCA CTTAAAAGTC GGTGTGAATT TATCTGTTGT TCAATTTAAC
CATGCAGATT TAATCCCAAC TATTTCAAAG GTTTTAGAAG AAACAGAGTT AAAACCAGAA
GCACTAGATA TTGAAATTAC AGAAAGTATC GCCATTAATC AAAATCAATC TGTAGTTGCA
AAACTAGAAC AGCTTCAAAA CCTCGGTATT CAAATTTCAA TTGATGACTT TGGAACCGGT
TATAGTTCTT TAGCTTATTT AACAAAATAT CCAATCAACA CATTAAAAAT TGCTCGAGAA
TTTATTTGCG GAATTACAAC TAGCCCTTTA GAGGAAGCGA TTATTTCTTC CATTATTACA
CTATCAAAAG AACTAAATTT AGAGGTTATT GCAGAAGGTG TAGAGACCGA AGAACAATGG
AAGTTTTTAT ATGAACAAAA CTGTGACCAC ATTCAAGGAT TCTTTATTAG CAAGCCCGTT
TCTAGTAAAG ACGTTTGGAG GTTACTCCAC AAAAAAACAA CCGTCTAA
|
|---|
| Protein sequence | MLTTDTWVLI GYFIAQSLVI YAVISLYRRE EYSSSRISLI IGFTIILVYG YIHLFQLNAG
IKPSSEVSYL IHTASILLIG LSSILYILDK PIQHETKTKY YRFDYVRFIL PYFSIIITFS
FIIFQPWDDK FMLIGLVLSL ILLFLRQLYM WKDNQALIDT YEQLTTQLEG KVEEGASALS
KSEQRYKSLF EDHPDAVFSL NMYGIFQQSN TACESLFTAY YCEVESYSLL HFIDPKDHDL
LQKALQLTKE GSPQTLEVRT KEKEGYYYYL HITLIPTFIN KEVVGMFGIA RDITTLYEKQ
KQVEHLAFHD ALTGLPNRRK FEKDLKNILN TAQASANDVA VMFLDLDRFK KINDRLGHGI
GDLLLIEVAK RLRGCLRSKD VVARQGGDEF TILLPDMYSE KSAAFIAEQI LNILNKPFFI
KDEELSITPS IGIAMYPDCG TDVTELMKNA DMAMYRAKAN GKNRFVFFSK EMSIAQNESN
FLEGELSKAL QQNEFFLEYQ PQVSTKTKQI IGFEALIRWK HPKLGIVSPA QFIPLAEETG
FIIELGNWIL RTACLEAKRW HNQGFSHLKV GVNLSVVQFN HADLIPTISK VLEETELKPE
ALDIEITESI AINQNQSVVA KLEQLQNLGI QISIDDFGTG YSSLAYLTKY PINTLKIARE
FICGITTSPL EEAIISSIIT LSKELNLEVI AEGVETEEQW KFLYEQNCDH IQGFFISKPV
SSKDVWRLLH KKTTV
|
|---|
| |