| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_5424 |
|---|
| Symbol | rho |
|---|
| ID | 7190319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | - |
|---|
| Start bp | 5118927 |
|---|
| End bp | 5120198 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643558834 |
|---|
| Product | transcription termination factor Rho |
|---|
| Protein accession | YP_002454344 |
|---|
| Protein GI | 218906510 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1158] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 8.80667e-59 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGT CAATTGCAGC ATTAGAAAAC ATGAAATTAA AAGAGTTATA CGAGCTTGCG
AAAGAATTTA AGATTTCGTA TTATAGCAAA TTAACGAAAA AAGAGTTAAT CTTCGCCATT
TTAAAAGCTC GAGCAGAAAA AGAAGGTTTC TTCTTCATGG AAGGCGTATT AGAAATTATT
CAATCAGAAG GATTTGGATT CCTACGTCCT ATCAACTACT CTCCAAGCTC AGAAGATATT
TATATCTCAG CTTCGCAAAT TCGTCGTTTC GATTTACGTA ATGGAGATAA AGTTTCTGGT
AAAGTACGAC CTCCGAAAGA AAATGAACGC TACTTTGGAT TATTACAAGT TGAAGCTGTA
AACGGAGATG ATCCAGAGTC AGCAAAAGAG CGTGTGCATT TCCCTGCATT AACACCATTA
TACCCAGATC GCCAAATGAA ATTGGAAACG GAACCGAAAA AGTTACCGAC ACGCATCATG
GATTTAATTG CACCAGTTGG ATTTGGACAA CGTGGTTTAA TTGTCGCGCC TCCAAAGGCT
GGTAAAACAA GTCTATTAAA AGAAATCGCG CACAGTGTTA CAACAAATCA TCCGGAAGCT
GAATTAATTG TACTTTTAAT TGATGAGCGT CCAGAGGAAG TAACAGACAT TGAACGTTCT
GTTAAAGGAG ATGTTGTAAG CTCTACTTTT GATGAAGTAC CAGAAAATCA TATTAAAGTA
GCGGAACTTG TGTTAGAACG TGCAATGCGT CTTGTAGAGC ACAAAAAAGA TGTTATCATT
TTAATGGATA GTATTACCCG TTTAGCGCGA GCTTACAACC TTGTTATTCC GCCAAGTGGT
AGAACATTAT CGGGTGGTAT CGACCCAGCT GCCTTCCATA GACCGAAGCG CTTCTTTGGA
GCTGCACGTA ATATTGAAGA AGGCGGTAGC TTAACTATTT TAGCAACAGC GCTTGTTGAT
ACAGGATCTC GTATGGACGA TGTAATTTAC GAAGAATTTA AAGGAACTGG AAATATGGAA
CTTCACTTAG ATCGTTCATT AGCTGAGCGT CGTATCTTCC CGGCAATTGA TATTCGCCGT
TCTGGTACAC GTAAAGAGGA TCTATTAATT CCGAAAGAAC ATTTAGACAA GCTGTGGGGT
ATTCGTAAAA CAATGCGTGA TACACCAGAC TTTGTTGAAA GTTTCTTACG TAAACTTCGT
CAAACAAAGA CAAATGAAGA ATTTTTACAA AACATTGTTG CAGATTCGAA AAGATATGTA
ACAACTAAGT AA
|
|---|
| Protein sequence | MNLSIAALEN MKLKELYELA KEFKISYYSK LTKKELIFAI LKARAEKEGF FFMEGVLEII
QSEGFGFLRP INYSPSSEDI YISASQIRRF DLRNGDKVSG KVRPPKENER YFGLLQVEAV
NGDDPESAKE RVHFPALTPL YPDRQMKLET EPKKLPTRIM DLIAPVGFGQ RGLIVAPPKA
GKTSLLKEIA HSVTTNHPEA ELIVLLIDER PEEVTDIERS VKGDVVSSTF DEVPENHIKV
AELVLERAMR LVEHKKDVII LMDSITRLAR AYNLVIPPSG RTLSGGIDPA AFHRPKRFFG
AARNIEEGGS LTILATALVD TGSRMDDVIY EEFKGTGNME LHLDRSLAER RIFPAIDIRR
SGTRKEDLLI PKEHLDKLWG IRKTMRDTPD FVESFLRKLR QTKTNEEFLQ NIVADSKRYV
TTK
|
|---|
| |