Gene BCAH820_5342 details

Gene Information

• Locus tag: BCAH820_5342
• ID: 7190945
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH820
• Kingdom: Bacteria
• Replicon accession: NC_011773
• Strand: -
• Start bp: 5040475
• End bp: 5040945
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643558752
• Product: RNA polymerase factor sigma-70
• Protein accession: YP_002454262
• Protein GI: 218906428
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 143
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAGCCAG CGACTTTTAC AGAGGCAGTT GTGTTGTATG AAGGATTGAT TGTGAATCAA 
ATAAAGAAGT TAGGGATTTA TCAAGATTAT GAAGAGTATT ATCAATGTGG GTTAATCGGT 
CTTTGGTATG CGTATGAAAG ATATGATGCG AAGAAGGGAA GTTTTCCTGC ATATGCAGTT 
ATAACTGTAC GTGGTTATAT ATTAGAAAGA TTGAAAAAAG AGTTTGCAGT GCAAGAAAAG 
TGTGTATGTG TAGGAGAGTA TGAGGCTCAC TTTCATTTTG AAGATATTGA AATGAAAGTG 
AAGGATTTTA TGAGTGTATT AGATGAGAAG GAGAAGTATA TTATTTTTGA ACGTTTTTTT 
GTAGGAAAGA CGATGGGGGA AATCGCTTTA GAGACAGAGA TGAGCTATTA TCAAGTGAGG 
TGGATATATC GACAGGCGCT TGAGAAAATG CGAAATAGCT TAAGAGGATA A 

 

Protein sequence

MKPATFTEAV VLYEGLIVNQ IKKLGIYQDY EEYYQCGLIG LWYAYERYDA KKGSFPAYAV 
ITVRGYILER LKKEFAVQEK CVCVGEYEAH FHFEDIEMKV KDFMSVLDEK EKYIIFERFF 
VGKTMGEIAL ETEMSYYQVR WIYRQALEKM RNSLRG