| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_5214 |
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| Symbol | vacB |
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| ID | 7189429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH820 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011773 |
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| Strand | - |
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| Start bp | 4914601 |
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| End bp | 4917021 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643558625 |
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| Product | ribonuclease R |
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| Protein accession | YP_002454136 |
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| Protein GI | 218906302 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 129 |
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| Fosmid unclonability p-value | 0.69895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAGAAA TCATACAAGA ACATATTGAT AAGTTGTTAT TATTTATGAG AGAAGAAGCG
TATAAACCGC TAACGATACA AGAGTTAGAA GAGGCATTTG GGATTGAAGG TTCTGAGGGC
TTCAAAGATT TCGTAAAGGC ACTTGTAACG ATGGAAGAAA AGGGACTTGT TATTCGTACT
CGTAGCAACC GTTACGGTCT TCCTGAAAAG ATGAATTTAG TACGTGGTAA GTTAATTGGA
CATGCACGTG GCTTTGCATT CGTTGTACCA GACGAGAAGA AAACAGGAGA TGATGATCTT
TTCATCCCGC CTACAGAGTT AAACGGTGCA CTTCATGGCG ATACAGTATT AGCACGCCTT
AGTTCCCAAT CGAGCGGTTC GCGTCAAGAA GGTTCCATTG TACGCATTTT AGAGCGTGGC
ACGAAAGAAT TAGTTGGTAC ATATACAGAA TCGAAAAACT TTGGATTTGT TATACCTGAC
AATAAACGTT GGACAAGTGA CATTTTCGTA TTGAAAAGCG CATCAATGGG CGCTGTAGAA
GGTCATAAAG TAGTTGTGAA AATTACGAGC TATCCAGAGA ATCGTTTAAG TGCAGAAGGT
GAAGTTATTC AAATTCTAGG TCATAAAAAT GATCCAGGAG TAGATATTTT ATCTGTCATT
CATAAACATC ACTTGCCTTT AGCGTTCCCT GAAGAAGTGA TGGAACATGC AAACAGTGTA
CCAGAAACGA TTTCAGAAGA AGATTTAAAA GATCGCCGTG ACCTACGTGA CCAAATGATC
GTAACAATTG ACGGTGCAGA CGCGAAAGAT TTAGATGATG CTGTTACAGT AACGAAGCTC
GAGAACGGTA ACTATAAGCT TGGCGTTCAC ATTGCGGATG TAAGCCATTA CGTTCAAGAA
GGTTCTCCAA TTGATGTAGA AGCAGCGGAA AGAGCGACGA GTGTGTATCT TGTTGACCGT
GTAATTCCGA TGATTCCACA TCGTCTATCT AACGGTATTT GTTCATTAAA TCCGAAAGTA
GACCGTCTGA CGTTATCTTG TGAAATGGAA ATCAACAACT TAGGTGACGT TGTCAAACAC
GAGATTTTCC AAAGTGTAAT TAAAACGACA GAGCGTATGA CGTATGCTGA CGTAAGAAGC
ATTTTAGAAG ATGAGGACGA AGAGCTAATT AAGCGTTATG AACCGTTAGT GCCGATGTTT
AAAGAGATGG GGCAATTAGC ACAAATTTTA CGTGAAAAAC GTATGCGCCG CGGTGCAATC
GACTTTGACT TTAAAGAAGC GAAAGTATTA GTGGATGAAG AAGGAAAACC GACAGATGTT
GTTATGCGTG ATCGTTCTGT ATCAGAGAAG TTAATTGAAG AATTTATGCT TGTTGCGAAC
GAAACAGTAG CAGAGCACTT CCACTGGATG AACGTACCAT TCATGTATCG TGTCCATGAA
GATCCGAAAG AAGATAAGTT AGAGCGTTTC TTCGAGTTTG TAACGAACTT CGGATATGCG
GTAAAAGGAC GTGCGAATGA AGTGCATCCT CGTGCGCTGC AACAAATTCT TGAAATGGTT
CAAGGACAGC CTGAAGAAGT AGTCATTTCA ACAGTTATGC TTCGCTCAAT GAAGCAAGCA
CGTTACGATG CAGATAGCTT AGGACATTTC GGTTTATCAA CGGAGTTCTA CACGCATTTC
ACATCACCAA TTCGTCGTTA TCCAGATACG ATTGTTCATA GATTAATTCG TGAATACATC
ATTAACGGTA AAGTCGACAA TGAAACGCAA GCAAAATGGC GTGAAAAATT ACCTGAGATT
GCAGAACACT CTTCTAATAT GGAACGTCGT GCTGTTGAAG CAGAGCGTGA AACAGACGAA
ATGAAAAAAG CAGAGTATAT GGTTGATAAG ATCGGCGAAG AGTATGACGG TATGATTAGC
TCTGTAACAA ACTTCGGTTT ATTCGTAGAG CTTCCAAATA CAATTGAAGG TCTTGTACAC
GTTAGCTACT TAACGGATGA TTACTATCGT TATGATGAGC AGCACTTCGC AATGATCGGC
GAACGTACAG GTAACGTATT CCGCATTGGT GACGAAATTA CAATTCGCGT TATTAACGTA
AACAAAGACG AGCGTGCAAT TGACTTTGAA ATCGTTGGTA TGAAAGGTAC GCCTCGTCGT
AAGTTCAAAG ACCGTCCAGT CGTTATCGAA CAGCCAAGAA CAGGCAGAAA GAAACGCGGT
GGACGTAGTG AGCGTAGTAA TGAGCGCGGC GGAGAACGTG GCACAGGAAG AAAATTTGAT
CGTGGTGGCA AAGGGAAAGG AAGAGGATCT GCATCCGCAT CCGCTAGCCA GCCAGGGAAA
AAAGATGGTA ACGGTAAGAA GAAAAAAGCA TTCTTCGAAA ACGTACCAGG ATTCAAGAAG
AAAAAGAAAA AGCGTAAGTA A
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| Protein sequence | MEEIIQEHID KLLLFMREEA YKPLTIQELE EAFGIEGSEG FKDFVKALVT MEEKGLVIRT
RSNRYGLPEK MNLVRGKLIG HARGFAFVVP DEKKTGDDDL FIPPTELNGA LHGDTVLARL
SSQSSGSRQE GSIVRILERG TKELVGTYTE SKNFGFVIPD NKRWTSDIFV LKSASMGAVE
GHKVVVKITS YPENRLSAEG EVIQILGHKN DPGVDILSVI HKHHLPLAFP EEVMEHANSV
PETISEEDLK DRRDLRDQMI VTIDGADAKD LDDAVTVTKL ENGNYKLGVH IADVSHYVQE
GSPIDVEAAE RATSVYLVDR VIPMIPHRLS NGICSLNPKV DRLTLSCEME INNLGDVVKH
EIFQSVIKTT ERMTYADVRS ILEDEDEELI KRYEPLVPMF KEMGQLAQIL REKRMRRGAI
DFDFKEAKVL VDEEGKPTDV VMRDRSVSEK LIEEFMLVAN ETVAEHFHWM NVPFMYRVHE
DPKEDKLERF FEFVTNFGYA VKGRANEVHP RALQQILEMV QGQPEEVVIS TVMLRSMKQA
RYDADSLGHF GLSTEFYTHF TSPIRRYPDT IVHRLIREYI INGKVDNETQ AKWREKLPEI
AEHSSNMERR AVEAERETDE MKKAEYMVDK IGEEYDGMIS SVTNFGLFVE LPNTIEGLVH
VSYLTDDYYR YDEQHFAMIG ERTGNVFRIG DEITIRVINV NKDERAIDFE IVGMKGTPRR
KFKDRPVVIE QPRTGRKKRG GRSERSNERG GERGTGRKFD RGGKGKGRGS ASASASQPGK
KDGNGKKKKA FFENVPGFKK KKKKRK
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