Gene BCAH820_4475 details

Gene Information

• Locus tag: BCAH820_4475
• ID: 7188456
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH820
• Kingdom: Bacteria
• Replicon accession: NC_011773
• Strand: -
• Start bp: 4230479
• End bp: 4231138
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643557886
• Product: TPR domain protein
• Protein accession: YP_002453424
• Protein GI: 218905590
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3063] Tfp pilus assembly protein PilF

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 60
• Fosmid unclonability p-value: 0.0000000000000190548
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTCAAACA AACTTGAAAC AGGTATTCAA TATATGCAAG AAGGAAACTG GGAAGAAGCT 
GCTAAAAATT TCACAGAAGC AATTGAAGAA AATCCGAAAG ATGCGCTTGG ATATATTAAT 
TTTGCAAACT TATTAGATGT ATTAGGTGAC AGTGAGAGAG CAATTTTATT TTATAAACGT 
GCATTAGAGT TAGATGATAA ATCTGCGGCT GCTTATTATG GATTAGGGAA CGTATATTAC 
GGTCAAGAGC AATTTGCAGA GGCGAAAGCT GTATTTGAAC AAGCGATGCA AGCTGGATTA 
CAATCAGCTG ATGTAACATT TATGTTAGGT ATTACGCATG TGCAACTTGG AAATGATCGT 
CTTGCACTGC CGTTTTTACA AAGAGCAACA GAATTAGATG AAAACGATGT AGAAGCTGTG 
TTCCAGTGCG GACTTTGTTT TGCACGATTA GAACATATTC AAGAGGCGAA ACCTTATTTT 
GAAAAGGTAT TAGAAATGGA TGAAGAGCAT GCGGATGCGT ATTATAATTT AGGTGTTGCG 
TACGTGTTTG AAGAAAATAA CGAGAAGGCT CTTGCTTTAT TTAAGAAAGC AACTGAAATT 
CAGCCAGATC ACTTTTTAGC TGGTAATGGT GTTCGTTTAT TAGAGCAAGA AGCTGAATAA 

 

Protein sequence

MSNKLETGIQ YMQEGNWEEA AKNFTEAIEE NPKDALGYIN FANLLDVLGD SERAILFYKR 
ALELDDKSAA AYYGLGNVYY GQEQFAEAKA VFEQAMQAGL QSADVTFMLG ITHVQLGNDR 
LALPFLQRAT ELDENDVEAV FQCGLCFARL EHIQEAKPYF EKVLEMDEEH ADAYYNLGVA 
YVFEENNEKA LALFKKATEI QPDHFLAGNG VRLLEQEAE