| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_4147 |
|---|
| Symbol | cpdB |
|---|
| ID | 7189723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | - |
|---|
| Start bp | 3958836 |
|---|
| End bp | 3961178 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643557558 |
|---|
| Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein |
|---|
| Protein accession | YP_002453097 |
|---|
| Protein GI | 218905263 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 197 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGT CAAAAAAAAT GCTGGCTGGA GCAACTCTTG CTATTGGGGT AATGGCGCCG
CAAGTATTGC CAGCAACAGC TCATGCGGAT GAGAAAACTG GGGAGAGTAC AGTTAACTTA
CGAATTCTAG AAACATCAGA TATTCACGTT AACTTAATGA ATTACGATTA TTACCAAACG
AAAACAGATA ATAAAGTAGG TCTTGTGCAA ACTGCAACAC TTGTTAATAA AGCTCGTGAA
GAAGCGAAGA ACTCTGTCCT ATTTGATGAT GGGGATGCAT TACAAGGGAC ACCGCTTGGA
GATTATGTAG CGAATAAAAT AAATGATCCG AAGAAGCCTG TGGATCCTAG TTATACACAT
CCATTATATC GTTTAATGAA TTTAATGAAG TATGACGTCA TCTCTCTTGG GAATCATGAA
TTTAACTACG GTTTAGATTA TTTAAACAAA GTGATTAGTA AAACAGAGTT CCCGGTTATT
AACTCAAACG TCTATAAAGA TGATAAAGAT AATAATGAAG AGAACGACCA AAATTACTTT
AAACCATATC ATGTTTTTGA AAAAGAAGTA GAAGATGAAT CAGGGCAAAA ACAAAAAGTG
AAAATTGGCG TAATGGGATT TGTTCCACCT CAAGTTATGA ACTGGGATAA AGCAAATTTA
GAAGGAAAAG TGAAAGCAAA AGATATAGTT GAAACAGCAA AGAAAATGGT GCCAAAAATG
AAAGCAGAAG GTGCAGATGT TATCGTTGCA CTAGCGCATT CCGGTGTTGA TAAGAGTGGA
TACAACGTCG GTATGGAAAA CGCGTCGTAT TATTTAACAG AGGTTCCTGG TGTAGATGCA
GTATTAATGG GACATTCACA TACTGAAGTG AAGGATGTAT TTAATGGTGT TCCAGTTGTA
ATGCCTGGTG TCTTTGGAAG TAACTTAGGT ATTATTGATA TGCAATTGAA AAAAGTAAAT
GGAAAATGGG AAGTACAAAA AGAGCAATCG AAGCCGCAAC TTCGTCCGAT TGCTGATAGT
AAAGGAAACC CACTCGTACA ATCTGATCAA AATTTAGTTA ATGAAATTAA AGATGATCAT
CAAGCGACAA TTGATTATGT GAATACAGCT GTAGGAAAAA CGACAGCGCC AATTAATAGT
TATTTCTCAT TAGTACAAGA TGATCCTTCT GTACAACTTG TGACAAATGC ACAGAAATGG
TATGTAGAAA AGTTATTTGC TGAAAATGGA CAGTATAGTA AATATAAAGG AATTCCAGTT
TTATCTGCAG GTGCACCATT TAAAGCAGGT GGCCGAAACG GTGCTACATA TTATACGGAT
ATTCCAGCTG GAACGTTAGC GATTAAAAAC GTTGCAGATT TATATGTATA TCCAAATACG
TTATATGCTG TAAAAGTAAA TGGGGCACAA GTAAAAGAAT GGCTTGAAAT GTCTGCAGGT
CAGTTTAATC AAATTGATCC AAAGAAAACA GAAGAACAGC CATTAGTAAA TATCGGATAC
CCTACATATA ACTTTGATAT TTTAGATGGC TTAAAATACG AAATTGATGT AACACAACCA
GCGAAATACG ATAAAGATGG AAAAGTTGTA AATGCTAATA CGAATCGTAT TATAAATATG
ACATATGAAG GTAAGCCAGT AGCTGACAAT CAAGAGTTTA TCGTCGCTAC AAATAACTAT
CGTGGAAGTA GCCAAACGTT CCCAGGTGTA AGTAAAGGGG AAGTTGTATA CCAATCACAA
GATGAAACAC GTCAAATCAT TGTGAAGTAT ATGCAAGAAA CACCAGTTAT TGATCCGGCA
GCAGATAAAA ATTGGGCATT TAAACCGATT GTTGCAGATA AATTAAATAC AACATTTGAT
TCTTCACCGA ATGCACAAAA GTATATAAAG AAAGATGGAA ACATATCATA TGTTGGACCA
TCTGAAAATG AATTCGCTAA ATATGCAATT GATATAACGA AGAAGAACGA TGATGATAAG
GAAACTGGTG GAGAGAACCC GACAACACCG CCAACCGGTG AAGGAGATAA TGGAGAGAAC
CCGACAACAC CGCCAACTGG TGAAGGAAAT AATGGAGAGA ACCCGACGAC ACCACCAACC
GGTGAAGGAA ACAATGGAGG AAATCCAACC ACACCATCAA CAGATGAAGG GAATAATGCT
GGATCTGGAC AAACTACAAC GGATAATCAA AACTCAAAAG AAACAACAAC TGTAAGTGAG
AACAAAGAAG AACGTGATTT ACCGAAAACA GGTACAAGTG TTGCGTCTAC AATTGGAGCA
GGTTTGGCGT TTATCGGAGC TGGATTCCTT CTGTTATTTA GAAGAAAGAA AGCAAATAGA
TAA
|
|---|
| Protein sequence | MKKSKKMLAG ATLAIGVMAP QVLPATAHAD EKTGESTVNL RILETSDIHV NLMNYDYYQT
KTDNKVGLVQ TATLVNKARE EAKNSVLFDD GDALQGTPLG DYVANKINDP KKPVDPSYTH
PLYRLMNLMK YDVISLGNHE FNYGLDYLNK VISKTEFPVI NSNVYKDDKD NNEENDQNYF
KPYHVFEKEV EDESGQKQKV KIGVMGFVPP QVMNWDKANL EGKVKAKDIV ETAKKMVPKM
KAEGADVIVA LAHSGVDKSG YNVGMENASY YLTEVPGVDA VLMGHSHTEV KDVFNGVPVV
MPGVFGSNLG IIDMQLKKVN GKWEVQKEQS KPQLRPIADS KGNPLVQSDQ NLVNEIKDDH
QATIDYVNTA VGKTTAPINS YFSLVQDDPS VQLVTNAQKW YVEKLFAENG QYSKYKGIPV
LSAGAPFKAG GRNGATYYTD IPAGTLAIKN VADLYVYPNT LYAVKVNGAQ VKEWLEMSAG
QFNQIDPKKT EEQPLVNIGY PTYNFDILDG LKYEIDVTQP AKYDKDGKVV NANTNRIINM
TYEGKPVADN QEFIVATNNY RGSSQTFPGV SKGEVVYQSQ DETRQIIVKY MQETPVIDPA
ADKNWAFKPI VADKLNTTFD SSPNAQKYIK KDGNISYVGP SENEFAKYAI DITKKNDDDK
ETGGENPTTP PTGEGDNGEN PTTPPTGEGN NGENPTTPPT GEGNNGGNPT TPSTDEGNNA
GSGQTTTDNQ NSKETTTVSE NKEERDLPKT GTSVASTIGA GLAFIGAGFL LLFRRKKANR
|
|---|
| |